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Detailed information on CNT30104402

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30450175	Oryza rufipogon	Saccharum spontaneum	26.7	22.41	83.45	145	forward

Expression of CNT30104402

Peptides detected in this lncRNA

>peptide 1 (45 aa)
LPSPFTCISTVVATSSVRVKQTYIVRGNKNTSKHFFFLHKKQNTS*

>peptide 2 (42 aa)
MLATTVRMSSGTAAATMDGWQCCGTGSTSLPVVLVSGHRALK*

Sequence

>CNT30104402
CTTCCATCCCCGTTCACGTGCATATCTACTGTTGTTGCTACATCGTCGGTTCGCGTCAAACAGACATATATAGTACGTGGCAATAAAAACACATCAAAGC
ATTTTTTTTTCTTACATAAAAAACAAAATACGTCGTAGATTGTACACGTACAACACTAATACCAGACTGTGCCCGTCCGTACGCGTACAGTCGACATACG
GTGTACACATACGTGTATACGCACTGTCATTATTATTCCCCCCTACCCACTTCTACACACAGCTAGTCCGTACACGTGGCGCACGCAGGACGCGCCACGT
GTGCACGACGAGGACCTCACACACAGCTAGATGTTGGCGACGACGGTGCGGATGAGCTCCGGCACGGCGGCGGCGACCATGGACGGCTGGCAGTGCTGCG
GCACGGGCTCGACGTCGCTCCCCGTCGTCCTCGTCAGCGGGCACCGCGCCTTGAAGTAGTCCGCCGTGCCCCGGCACGCCACGACGGCGCCGCCGGCGCC
GACGACGCGCTGCGACCGCGGGCACCCGGCGTTCAGGTCGGCC