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Detailed information on CNT30104398


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30148178Oryza rufipogonBrachypodium distachyon29.956.4898.36122forward

Expression of CNT30104398

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MLHRLCRPPSIPFDFGLATVLPRRSVSRVSWAPDPRRPRANTHRLRHGLPGYLILFAPHAFTPQRR*

>peptide 2 (29 aa)
MLSHPSVGRDPESCLRFWRSFVDLRISPLH

Sequence

>CNT30104398
CTTGACCAAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCTGTATGAAAGTCAGTACCATCCCGTTAAGGACATGTTTTGTTGTTCATATGT
CAAGGGCTAGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGCTTGTGCAGGCCCCCGTCAATTCCTTTTGATTTCGGTCTTGCGACC
GTACTCCCCAGGCGGAGTGTTTCACGCGTTAGCTGGGCCCCTGATCCGCGTAGACCAAGGGCGAACACTCATCGTTTACGGCATGGACTACCAGGGTATC
TAATCTTGTTCGCTCCCCATGCTTTCACACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTACGGATTTCAC
CCCTACAC