Detailed information on CNT30104359


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002110, E-value = 1e-119

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595610Oryza rufipogonOryza meridionalis100.46101.8792.66218forward
CNT30371434Oryza rufipogonOryza glumipatula100.4610098.17218forward
CNT30578563Oryza rufipogonOryza barthii100.46100.4694.5218forward

Expression of CNT30104359

Peptides detected in this lncRNA

>peptide 1 (40 aa)
GLCARKLEVASSTPSKGDLYRWGSARRKEQGRFASRTKGR*

Sequence

>CNT30104359
TGGCCTCTGTGCACGCAAGCTTGAGGTAGCAAGTTCGACTCCTTCAAAAGGAGATTTGTACCGCTGGGGAAGTGCCAGAAGAAAAGAACAAGGAAGATTT
GCTAGCAGGACAAAAGGACGGTAAACTTGGAAAAAAAAAGGTCCAGAAGAAAAGAACAAAGAAGAGCTGCTTGAAGGAGTCGAACTTGCTACCTCAAGCT
TGCGTGCACATAGGCCA