Detailed information on CNT30104358


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671247Oryza rufipogonSetaria viridis23.163.5898.4163reverse complement
CNT30269710Oryza rufipogonChenopodium quinoa23.161510063reverse complement
CNT3093646Oryza rufipogonSolanum tuberosum22.062.993.3360reverse complement
CNT30226250Oryza rufipogonHordeum vulgare23.164.7810063reverse complement
CNT30627905Oryza rufipogonDaucus carota23.532.5510064reverse complement

Expression of CNT30104358

Peptides detected in this lncRNA

>peptide 1 (55 aa)
PFSIHPIMDLLMGNYYLAFTNESLSMAVTVFFYYFEFIFYIYGSVQHFHDIVMIN*

Sequence

>CNT30104358
CCATTCTCCATTCACCCAATAATGGATCTTCTTATGGGCAACTATTATTTAGCATTCACAAATGAATCATTGTCTATGGCGGTAACTGTATTTTTTTACT
ACTTCGAGTTTATTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTAGCGATGATCCAAAGCTAAAAGAT
TAAAAAAAGGCGAGAGCAGCATAATCGTTAGTTAGGGGACGGGCCCGTATAGAAAGTCAATCCTTCTTTTTC