CANTATAdb - search

Detailed information on CNT30104356

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30697519	Oryza rufipogon	Oryza sativa	50	82.03	99.6	251	forward
CNT30554866	Oryza rufipogon	Oryza glaberrima	49	44.17	97.56	246	reverse complement

Expression of CNT30104356

Peptides detected in this lncRNA

>peptide 1 (30 aa)
METERTRGGGSGGLGEEAARGGWASGAEAA*

>peptide 2 (39 aa)
LGCSALDTDLVNRCGRSSCGYPPPRHRYSSVIPFPPSSG*

Sequence

>CNT30104356
CCTTGGTTGTTCTGCCCTGGATACCGATTTGGTGAATAGGTGTGGACGCAGCTCCTGCGGATACCCTCCTCCTCGCCATCGCTATTCATCTGTCATCCCT
TTCCCCCCTTCTTCAGGGTAGCGGGAGATTAGAGGTGGATGTGATGCGCCGGTGCCGGTGGGGTATACGGCGGCGGCAGGGGTGGGATGGAGCCGCGGTG
ATGAGGGGATGAGTAACGCCGGCAATGGAGACAGAGAGGACTAGAGGGGGAGGTAGCGGCGGCTTGGGAGAAGAGGCGGCGCGCGGCGGCTGGGCCTCAG
GAGCGGAGGCGGCGTGAAGACGAGAAGAGTCGCGTTCTTTCTTCTTCTTTTTTTTACCGCAGGGACGTGGAAGGACCTCGTTGTGAAAGAAATTTCTAGA
AGGACTAAGAAGATATTTCGCCGATCTAGGATCTAACGGCCTGAAACTTTCTGAATAGGAATCGGACGGTCCATATTTTGTTGATGACGTGTCTCAATGT
TG