Detailed information on CNT30104338


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597235Oryza rufipogonOryza meridionalis100.2247.0894.77459forward

Expression of CNT30104338

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MTFLFRFVSPRCFNLSHTMMHDFIFLSCTTILLQFIPDTTDGGNATGSSVVAWVDTAY*

>peptide 2 (30 aa)
MTLFFSPVLLYCYNSYQIPPTVGMLQGAVL*

>peptide 3 (42 aa)
MIINFNNVLGFILTEALCLNLHDIFIQICITPMFQLVTHDDA*

Sequence

>CNT30104338
TGCTTAACACACTCCGTTCACGTCGAGTAGCCATAGTAGCTTAGAACCAAATGTAGGAACACATCGTAAAGTTGTAAATGCAACCATAGTAGACGGTGAT
GATAATTAATTTCAACAATGTACTAGGATTTATCCTTACAGAGGCATTATGTTTAAACTTGCATGACATTTTTATTCAGATTTGTATCACCCCGATGTTT
CAACTTGTCACACACGATGATGCATGACTTTATTTTTCTCTCCTGTACTACTATACTGCTACAATTCATACCAGATACCACCGACGGTGGGAATGCTACA
GGGAGCAGTGTTGTAGCTTGGGTAGATACCGCATATTGACGGCATGTTTAGGGCCAACATAGCTTGGGCTTGAGCTTGACTCTGATCGAAGTAGACGCCA
GCAAACTGTTGTAGCCGTAGCTGCTGCACAATCGCCTGAACACTGCTAATGGCCTGGC