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Detailed information on CNT30104321


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002200, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30118092Oryza rufipogonOryza nivara54.1679.2696.28619forward

Expression of CNT30104321

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MEVERIVKLRPLYASRRGVPGAALRPWVWFMPG

Sequence

>CNT30104321
CCCCATTCTAGAAGCTGCGGTCGTACTCGTTCGTTTGACATAAGTACTTGGTAAACTTATATCGACTGAGACAGTACTAGCCACCCGAAAATCAACCAAA
TCTTACGTACTGTCCCAATCTAAGTTCATTATATTTTATGCATTCTAACTAGGCAGGGCTAAGCAAAAGCTTGCATATAACTGGTTTGCTATATGTTCAG
ATTATGCATTCAAAATCATGAATGGCTAATGCATAGAATAGAATGTAGAATATAGGATAATTATGCTCAAAGGAGAGGAATAATAACTTGCCTTGCTCCA
ACACAAATAAATCCAAGATAGGCAACCTGATTATACGATTCTCGAAATACCATAGGTTGCCATCCAAAAGACAATAGACTCTACTGAGAAAGAGGAAGAA
CCAATTTCAATTAAAGCCATAAAATAATAAGAAAACGATAAACGACTAAGAGGGTTAGGGTTTAAGGTATAACCTATCTCTTTTATAGGGTATAGGGAAT
ATGGGGCTAGTATTTGCTAGTGGTAGGTTTAGGTAGTATAATACCTAGGGTTTAGTTATTTGGGAGTCGATTGTGGAGTAGGATAGCATATCGGTTAGGC
TCTATATTTTATGTGGAGGTTCTAGAGGATTGGAGGCTAGAGGGGATTAGGCAACTACTGTCGCTTATATTTTATGTGAAGGCTCTCGTGGTTTGGATGA
TAGGAAATATACTGGATAGTTGATATGGTTAAATAGGCATGTGACTAATATGGGTCAAGGTTGGCTTTGATAGAATAGTGGCTAGGATTTAGTTGTTTAG
GCCGATATCGAGGTAGGATAAATATCGGCTAGGATTTTAGGTGTTTGCTAGTCGTCGTTAGAGTTGGGTAGCATGACGACTAGGTTTGGTATCATTTCTA
GCCGTGTCGATAGACAACATATCGGCTAGAAGAATAGGAGGTGGGTGCAGGTTTAGTGGGGTGGAAGTGTTACTCCGACAAACGTGAGTGGCGGCGGAGC
GGCTAGGATCGCACAGAGCTCAAGAGCTAACTGTGCGGCGTGCAATGGAGGTCGAGAGGATAGTGAAGCTCCGACCACTATACGCATCAAGGCGTGGGGT
GCCAGGAGCAGCACTTCGACCTTGGGTTTGGTTTATGCCGGGC