Detailed information on CNT30104264


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000307, E-value = 3e-106

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696923Oryza rufipogonOryza sativa5542.9199.59242forward

Expression of CNT30104264

Peptides detected in this lncRNA

>peptide 1 (52 aa)
GRWQRGAAGAREPEQQCSRSPAAARERAAREQEQPSSSSAAGVSRSTGSSSS*

>peptide 2 (43 aa)
QAGGSVAPREHVSRSSSAAGVRRRRGSALRVSRSSRAAAAPQE*

Sequence

>CNT30104264
CAGGCCGGTGGCAGCGTGGCGCCGCGGGAGCACGTGAGCCGGAGCAGCAGTGCAGCAGGAGTCCGGCGGCGGCGCGGGAGCGCGCTGCGCGTGAGCAGGA
GCAGCCGAGCAGCAGCAGCGCCGCAGGAGTGAGCAGGTCTACAGGGAGCAGTAGCAGCTAGCAGGCCAGCAAGAAGGAAAAGACAAATGGAAGGTAGCAG
CGCCAAAGGAGGAGCTGGAGACTCTGATAGTCTGTCCAGTGTCCACTGCAGATAAGGAACTTGAAGTGCATATGGCCAATATAGCTAAATTAGCTTATAG
CCTTGTACTACTCCTGAAGGGCATTGTTTTGGTTGTCTTTTTCTTCTGAAATCTGGACCAAATGGTCTTGCATGCTGTGAATATATGGTGTTGTAAACAG
TTGTCAATGAGCACATTGTAATTTCTACTTATCAGATTGG