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Detailed information on CNT30104235


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30110484Oryza rufipogonOryza longistaminata25.5517.586.07280forward
CNT30578208Oryza rufipogonOryza barthii50.8285.8299.64557forward

Expression of CNT30104235

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVVFDHSLRSFSIALVNLLGEVHYNSLYDIEVIKFDGIPMPVAG*

>peptide 2 (90 aa)
SLIAYSFIPRVMVRIFGSLNSVAPLLRTLAVSPSSRSTPLAPTHRRSPPLRHRFLPPSSLQFHHPLSRGALTLAPSPNPNLARAPTSFYR*

>peptide 3 (77 aa)
FTHRLFFHSSCNGPDLRLPEFRRPPPPHSCGLALLAIDSPRPDSPPVSSPPPQIPPSLLFAIPPSSFQRGSHPCSLP*

Sequence

>CNT30104235
TTTCACTCATCGCTTATTCTTTCATTCCTCGTGTAATGGTCCGGATCTTCGGCTCCCTGAATTCCGTCGCCCCCCTCCTCCGCACTCTTGCGGTCTCGCC
CTCCTCGCGATCGACTCCCCTCGCCCCGACTCACCGCCGGTCTCCTCCCCTCCGCCACAGATTCCTCCCTCCCTCCTCTTTGCAATTCCACCATCCTCTT
TCCAGAGGGGCTCTCACCCTTGCTCCCTCCCCTAACCCTAATCTCGCCCGCGCCCCCACCAGCTTCTACCGCTGACCGTCGCGCCGTGCCGCCCCGCCTC
GCCCTCTTCAACCGCCGACCGTCCCGTCGCCCTGCATCTTGCCCGCGCCGCCGCCGTCGTGTTATCCCGCCACCGCAGAATTAGCATGGATCAGGCAAAA
GGGTTGACGTGCTCCAGTGTAAGAATTGCTTGAGACTCGGTTGTCAAGAGCGCTGCTTTGACGACTTCCTCCTCGGCCTCCGCCTCAACTGCCACCGCCG
CCACTGCCGCGTCGTCCGACAATATTTGGTTCATGGTAGCACATGGGTTTGGTAAATCTATCCCAATGAAAAATGGTGGTATTTGATCATTCCCTTCGTT
CCTTTTCTATAGCTTTGGTTAACCTTCTGGGTGAGGTGCACTACAATTCCTTGTATGACATTGAAGTCATAAAATTTGATGGAATACCAATGCCTGTTGC
GGGGTAATTTGCCCTCAATCTGAGGTATTGCCATGAGTATTATCATTTTCTCCCTGTAAATTGCAACAAGGTGTTTTATTAAATGGCTGCTTCGTTATAA
CATGGTGTTCTGTTCATGTGAACTTGTGAAATGGCTGAGAAGTTCTTTTTAGCTAAAGTGCAGTAGTTGTGCTATGTTGTGAAGAGTGAAATGAAGTATT
AGCAAAAGGGTGAGACATGGGTTAAAGTTCCAGTGATATGAAATCGTTCATCCCTGTCTTGATTCCTGGAAGATGATATTTTTTTCCAAGTAGCTTTGAT
GAAATGTAGCAATGAGTAAATGACCAAAATTGTAATAATCTTTGTATGGATTTGAACACCATCGATATGATTTTTTAAATGAACTTCTTGTGTTAT