Detailed information on CNT30104233


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001752, E-value = 1e-129

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691892Oryza rufipogonOryza sativa67.6338.6898.72234forward
CNT30596253Oryza rufipogonOryza meridionalis31.55.6599.08109reverse complement

Expression of CNT30104233

Peptides detected in this lncRNA

>peptide 1 (97 aa)
MRALTPPLTLITSPTTPKWAKEKGTGRRIGTGVRRDGLWYINHEELGLAAVVGDVEKEISLLQCQLGHPSFKILSKLYPDLFSRVDKHRLVCDACELG

>peptide 2 (51 aa)
IGEQVTQWEEWQKNKTNESSNTTTHFDNFANYAQVGKGEGDWEEDWDWSQA*

Sequence

>CNT30104233
TAATAGGTGAACAAGTGACACAATGGGAGGAATGGCAGAAGAACAAGACCAATGAGAGCTCTAACACCACCACTCACTTTGATAACTTCGCCAACTACGC
CCAAGTGGGCAAAGGAGAAGGGGACTGGGAGGAGGATTGGGACTGGAGTCAGGCGTGATGGGTTGTGGTACATCAATCATGAGGAACTGGGACTAGCTGC
GGTGGTTGGAGATGTTGAGAAGGAGATCAGTTTGCTTCAATGTCAGTTAGGACATCCATCTTTTAAGATTTTGAGTAAGTTGTATCCAGACCTCTTTAGT
AGAGTGGATAAGCATAGATTGGTGTGTGATGCTTGTGAGCTTGGCA