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Detailed information on CNT30104183


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691798Oryza rufipogonOryza sativa10.0432.2486.9669reverse complement

Expression of CNT30104183

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MIDLLFVSTQQSLGPGWTGAGRFTPSLHQFF

>peptide 2 (41 aa)
STIFHIHIDVNESKHIYLSRFININMNVGNARMTYIVKRRK*

>peptide 3 (40 aa)
MLSTISNDVLMPQRRLYIFPRYTYGNVSNFICATLGAATS*

>peptide 4 (34 aa)
MSLCLNADCIYFRAILTVTYQTLFVLRLEPQRAR*

Sequence

>CNT30104183
ATTCTACCATTTTTCACATTCATATTGATGTTAATGAATCTAAACATATATATCTATCTAGATTCATTAATATCAATATGAATGTGGGAAATGCTAGAAT
GACTTATATTGTAAAACGGAGGAAGTAGATGAAACTGCATATGTAAAAGACCTAATACATCATTAATACACTAAAATATATCACTACTTACATCACCGTT
TATAACTCACTTATTTCCAAATCCATATAGATATTCTTAAAAATACCACTTCTACCTATCAATGAAATAACACCTTTAAAACCTAGGCATGAATACCACT
ATAATAGGCAAAGCTGGCTGTAGCCGCCAAGTCTTTCTTCCTCTATTGTGTTGAACGATGAGTCCCGCATCGATGAGGTCGTACCTCTTAGCCAGGATTA
GCCTAGAGCGCAATTTTAATTCCTGATTCAATAACAATATTCGTATGGAGTATTGCATCGATCAATAGTATGTTAAGCACTATTAGCAACGATGTCCTTA
TGCCTCAACGCCGATTGTATATATTTCCGCGCTATACTTACGGTAACGTATCAAACTTTATTTGTGCTACGCTTGGAGCCGCAACGAGCTAGATGATTGA
TCTCTTGTTTGTATCCACGCAGCAATCATTGGGGCCGGGCTGGACAGGAGCAGGCCGGTTTACACCCAGTCTCCACCAATTTTTTTT