Detailed information on CNT30104125


BLAST search results

BLAST vs Swiss-Prot:
sp|P33624|TBA2_ANEPH, E-value = 4e-153

BLAST vs NONCODE:
NONGMAT000219, E-value = 4e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677760Oryza rufipogonSetaria viridis36.7153.4790.52485forward
CNT30522101Oryza rufipogonSetaria italica43.7554.5389.79578forward
CNT30547493Oryza rufipogonIpomoea triloba35.8842.484.81474forward
CNT30729860Oryza rufipogonCorchorus capsularis38.0854.3881.71503forward
CNT30379228Oryza rufipogonManihot esculenta42.3264.1181.75559forward
CNT30403515Oryza rufipogonBeta vulgaris13.9371.685.87184forward
CNT30177039Oryza rufipogonSecale cereale50.2648.987.95664forward
CNT30295550Oryza rufipogonTriticum aestivum39.6775.488.74524forward
CNT30391405Oryza rufipogonTriticum turgidum39.0667.9890.31516forward
CNT30439881Oryza rufipogonAegilops tauschii38.0865.5889.86503forward
CNT30249355Oryza rufipogonAvena sativa35.0561.5789.2463forward
CNT30662251Oryza rufipogonTriticum dicoccoides39.0676.1190.7516forward
CNT30265526Oryza rufipogonBrassica rapa34.7546.2281.26459forward
CNT30446538Oryza rufipogonSaccharum spontaneum46.1878.2190.66610forward
CNT30953Oryza rufipogonZea mays45.1963.1189.28597forward
CNT30361562Oryza rufipogonSorghum bicolor41.2655.1187.89545forward
CNT30619808Oryza rufipogonCajanus cajan23.9253.1181.33316forward
CNT30582828Oryza rufipogonEchinochloa crusgalli49.8176.6988.45658forward
CNT30724701Oryza rufipogonLupinus angustifolius40.847.7481.08539forward

Expression of CNT30104125

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MPHLNPVGHQSTNWMVRFVLMVATAAFTSLGTTSPRYIRQHAMYLPWRGSHLAIMEDGSKALLVISATESCSW*

>peptide 2 (56 aa)
MPSPTYQWTKARLEYMRSNLMSMRENTSTTLVELEIMHTALCTLARSPPGTTLGGW*

>peptide 3 (42 aa)
HINNTGHSSESYKQTLHNRKANVFQNQTHKLIDRSPHGQIIG*

Sequence

>CNT30104125
TTCACATAAACAACACAGGTCACAGCAGCGAAAGCTACAAGCAAACCCTGCATAATCGAAAAGCAAATGTTTTTCAAAACCAGACACACAAACTGATAGA
TAGAAGCCCACACGGACAGATCATAGGATAGCAGCAGTAATCAAGCATTGCCAAGGCACCAGGCAAGAACCCTGAACCTCTCTAGTACTCGTCACCCTCA
TCACCCTCGTCACCATCGTCGAACTCGGAGCCGACCTCCTCGTAGTCCTTCTCCAGCGCGGCGAGGTCCTCGCGGGCCTCGGAGAACTCCCCCTCCTCCA
TGCCCTCGCCGACGTACCAGTGGACGAAGGCGCGCTTGGAGTACATGAGGTCGAACTTGATGTCGATGCGGGAGAACACCTCGACGACGCTGGTGGAGTT
GGAGATCATGCACACGGCCCTCTGCACCTTGGCCAGGTCTCCCCCCGGGACGACGCTGGGCGGCTGGTAGTTGATGCCGCACTTGAACCCCGTGGGGCAC
CAGTCCACGAACTGGATGGTGCGCTTCGTCTTGATGGTGGCCACCGCGGCGTTCACGTCCTTGGGGACCACGTCGCCGCGGTACATCAGGCAGCACGCCA
TGTACTTGCCGTGGCGCGGGTCGCACTTGGCCATCATGGAGGACGGCTCGAAGGCGCTGTTGGTGATCTCCGCCACGGAGAGCTGCTCGTGGTAGGCCTT
CTCGGCCGAGATCACCGGGGCGTAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAGGTTGGTCTGGAACTCGTTGACATCCACATTCAGAGCA
CCATCGAACCTCAGGGAGGCAGTCAGTGAGGAGATGACCTGCAGCACATTAGCATTAGCCACATGATGTCAAGACAAATTGCACATTACATTGATCTTAC
AGCAAATAACTGGAGTACATAGCGCTGCAAGGAAAGATGCAGGGCAGTACCTGGGACACAAGCCTGTTGAGGTTGGTGTAGGTTGGGCGCTCAATGTCGA
GGGAGCGGCGGCAGATGTCATAGATGGCCTCATTGTCGAGCAGGACAGCGACATCGGTGTGCTCAAGGAGGGAGTGGGTGGAGACCTGAGGGGACGGGTA
CACGGTGAACCCGAGCTTGGACTTCTTGCCATAGTCCACAGAGAGACGCTCAAGGAGAAGGGAACCGAGACCGGAGCCCGTTCCTCCTCCAACAGCGTTG
AACACAAGGAAGCCCTGGAGACCAGTGCAGTTGTCGGCAAGCTTCCTGATGCGGTCAAGGCACAGATCAACAATCTCCTTGCCAACTGAAACGAACGGCA
CCACATGTTAGACATCCAAAC