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Detailed information on CNT30104124

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30371257	Oryza rufipogon	Oryza glumipatula	65.91	59.37	97.35	377	forward
CNT30578337	Oryza rufipogon	Oryza barthii	29.55	15.27	99.41	169	forward

Expression of CNT30104124

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MPKRRRNNRSGCVGRGFHRHQISGKSRQRISI*

>peptide 2 (46 aa)
LHAEAKGRVNLARTVVDSISPCPSFIFVFLQQAASSCCCSPCCFSR*

>peptide 3 (66 aa)
MSIVHLRLPAASGVKLLLLAVLLLAVMHCGCAMAVQGGGGGWRRMLRGPVSTPGSPMPNGQPNHNG*

Sequence

>CNT30104124
CTCCATGCAGAAGCTAAGGGCAGAGTAAATCTCGCTAGAACTGTAGTTGACAGTATATCACCATGTCCATCGTTCATCTTCGTCTTCCTGCAGCAAGCGG
CGTCAAGCTGCTGCTGCTCGCCGTGCTGCTTCTCGCGGTGATGCATTGCGGCTGCGCCATGGCCGTGCAAGGAGGAGGAGGAGGATGGAGGAGGATGCTG
CGCGGGCCGGTGTCCACGCCAGGGTCGCCGATGCCAAACGGGCAGCCGAATCATAATGGCTAATTAAATCAGGTGCTTTCTTTACATTTTACGTGTAATT
TACTGCCAATGCCCAAGAGGCGCCGAAATAATAGATCTGGTTGTGTGGGAAGAGGATTTCACCGCCACCAAATCAGTGGGAAGTCACGTCAGAGGATCTC
AATCTAGTTGTCTATGCTGTATTGTATGTTCGAAATCGTGTAACTGAAATATTCATAACCTTACATAACTGTTACGGTAAATTTAATAAAATCCATGTGG
CATTGTGTAACCAACTCTATATAGAGCATATGGTTCTCTGAAATATAATGTGTATATGCCTCTTTTTATTCA