Detailed information on CNT30104115


BLAST search results

BLAST vs Swiss-Prot:
sp|Q84N29|NLTP3_WHEAT, E-value = 2e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677319Oryza rufipogonSetaria viridis39.5343.5985.71119forward
CNT30523964Oryza rufipogonSetaria italica50.1747.4885.43151forward
CNT30550009Oryza rufipogonIpomoea triloba22.2611.5188.0667forward
CNT30589697Oryza rufipogonMusa acuminata20.9320.1987.363forward
CNT30440524Oryza rufipogonAegilops tauschii20.938.2688.8963forward
CNT30136754Oryza rufipogonLolium perenne46.5160.3484.29140forward
CNT30352809Oryza rufipogonEragrostis tef51.535.6383.23155forward
CNT30597201Oryza rufipogonOryza meridionalis65.7878.5795.45198forward

Expression of CNT30104115

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MIYLLQSVERLMGKPTLTPHLPGMPAAAPRLRDLMVPARVLRHRQAAWRSAVVRAALFSPLTPLQHPWVRPPLPVT

Sequence

>CNT30104115
AGCACGTAAAAAATAAAGAGATATATGCGTGTATATATATATAGAGAGAGAGAGAGAGGAGTCATAGAGAGATGATATACTTGTTGCAGTCGGTGGAGAG
GCTGATGGGGAAGCCGACGTTGACGCCGCACTTGCCGGGGATGCCGGCGGCGGCGCCGAGGTTGAGAGACTTGATGGTGCCGGCGAGGGTCTTGAGGCAC
CGGCAGGCGGCCTGGCGGTCGGCGGTGGTGCGGGCGGCGTTGTTCAGCCCCTTGACGCCGTTGCAGCATCCCTGGGTGAGGCCGCCCCTCCCCGTCACGT
A