Detailed information on CNT30104065


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555882Oryza rufipogonOryza glaberrima10075.6298.6214forward
CNT30597256Oryza rufipogonOryza meridionalis93.4639.2298.5200forward
CNT30371462Oryza rufipogonOryza glumipatula10012.8198.6214forward
CNT30578372Oryza rufipogonOryza barthii93.4614.6398200forward

Expression of CNT30104065

Peptides detected in this lncRNA

>peptide 1 (31 aa)
DRTCTQGACNIKYTADTEREWSAACLPQVLF*

Sequence

>CNT30104065
GATAGAACATGCACACAGGGAGCGTGCAACATAAAGTATACAGCTGATACAGAGAGAGAATGGAGCGCTGCATGTCTGCCGCAGGTGTTATTTTAATTAC
TTTGTTCATATATGCTGTAGCAAATACGTGCTTAATTACTAGCTGATCAACTCCGATCGAGCTAGCGTGTTAAGCTCGATCGATCGATCCAAGCAGGATT
AATTGATCTAGCTG