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Detailed information on CNT30104062


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001768, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30459719Oryza rufipogonSaccharum spontaneum11.3225.993.8565forward

Expression of CNT30104062

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNPGLQDMNLGLQGPKVKYLFLNRDMYSGCRIHR*

>peptide 2 (45 aa)
DKVRDQTISLKHIKTERMLADPLTKGLPPNVFKEHVAGMGLREAL*

Sequence

>CNT30104062
GACAAAGTCCGGGATCAAACAATAAGTCTCAAGCACATTAAAACAGAAAGGATGCTCGCGGATCCGCTCACGAAAGGCCTACCACCCAACGTGTTCAAGG
AACATGTAGCCGGCATGGGTTTAAGGGAAGCCTTATGAATCCTGGACTACAGGATATGAATCTTGGACTACAGGGCCCAAAAGTAAAGTATCTGTTTCTG
AATAGAGATATGTATAGTGGCTGTCGAATCCATCGGTGATTGACCGTGACGATGAAACATGCTCTATTTACAAATCTGTGATGGAATAGAAAAAGCTAAA
AGAAAAAGTGAGATCAAGGGGGAGAATGTTAAATAGATCTCCCTCCCCTTGAGCCCAACGGCTCAAGGGGGCCTTGACCGCGCCCTGATCGGGGGCGCCC
AACCCAAATGGCTGGTGGGCCCCCGTCACACTGCGCCATATAAAAGAGGGGTGGAGGCCGGCACGGCACAAGGTACAAAGTTCACCACCGCCGCCAACTC
CACCCCACAAAACCCTAATCCGATCGAGGGGGCGCAGCCAGTGACGGGAAACGCCACCGCCGCGCCACGACCTC