Detailed information on CNT30104032


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0IQK9|NLTP1_ORYSJ, E-value = 1e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30182112Oryza rufipogonSecale cereale24.99.3386.8961forward
CNT30222607Oryza rufipogonHordeum vulgare20.8215.688.2451forward
CNT30389829Oryza rufipogonTriticum turgidum20.4189250forward
CNT30371456Oryza rufipogonOryza glumipatula10090.41100245forward
CNT30118027Oryza rufipogonOryza nivara96.7364.0590.3237forward

Expression of CNT30104032

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MLAALPALSPLMPRAAFLRQGPTAELTWPQVMATAACGAARSRAATTATNTNCARAMVPTTVARSIGV

>peptide 2 (80 aa)
ADGVGDADAALRGDAGGVAGVEPLDAAGRVLEAGPNGGVDLAAGDGHGGVRGGEEQSCHNGDQHQLCTGHGSYYCCSIDRC

Sequence

>CNT30104032
CGCTGATGGTGTAGGGGACGCTGACGCCGCACTTAGAGGGGATGCTGGCGGCGTTGCCGGCGTTGAGCCCCTTGATGCCGCGGGCCGCGTTCTTGAGGCA
GGGCCCAACGGCGGAGTTGACCTGGCCGCAGGTGATGGCCACGGCGGCGTGCGGGGCGGCGAGGAGCAGAGCTGCCACAACGGCGACCAACACCAACTGT
GCACGGGCCATGGTTCCTACTACTGTTGCTCGATCGATCGGTGTG