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Detailed information on CNT30103876


BLAST search results

BLAST vs Swiss-Prot:
sp|P32112|SAHH_WHEAT, E-value = 6e-96

BLAST vs NONCODE:
NONBNAT006042, E-value = 4e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675638Oryza rufipogonSetaria viridis99.7891.593.58452forward
CNT30702258Oryza rufipogonQuercus lobata36.4235.1186.06165forward
CNT30376211Oryza rufipogonArabidopsis thaliana77.2648.4185.71350forward
CNT30619260Oryza rufipogonSesamum indicum78.1533.2484.75354forward
CNT3020603Oryza rufipogonCitrullus lanatus77.0422.5581.66349forward
CNT3072357Oryza rufipogonQuercus suber58.525.889.43265forward
CNT30380227Oryza rufipogonManihot esculenta32.8935.7390.6149forward
CNT30402445Oryza rufipogonBeta vulgaris44.3745.2787.06201forward
CNT30200315Oryza rufipogonPisum sativum24.0621.1289.91109forward
CNT30505192Oryza rufipogonNicotiana attenuata37.7530.2785.38171forward
CNT30709695Oryza rufipogonGlycine max34.2246.4192.26155forward
CNT30543653Oryza rufipogonBrassica napus76.8250.4385.63348forward
CNT3076654Oryza rufipogonBrassica juncea22.5221.8492.16102forward
CNT30261371Oryza rufipogonBrassica rapa70.276.0883.96318forward
CNT30612558Oryza rufipogonArabis alpina67.3380.984.59305forward
CNT30607325Oryza rufipogonGossypium raimondii32.0111.2491.03145forward
CNT30231757Oryza rufipogonAnanas comosus26.9346.3986.07122forward
CNT30720770Oryza rufipogonTriticum spelta41.7231.591.53189forward
CNT30705212Oryza rufipogonPrunus avium38.8547.8384.66176forward
CNT3021984Oryza rufipogonPopulus trichocarpa10021.1886.31453forward
CNT30329805Oryza rufipogonDioscorea rotundata66.6751.4588.08302forward
CNT30117878Oryza rufipogonOryza nivara99.3410099.33450forward
CNT30723539Oryza rufipogonLupinus angustifolius77.4827.5783.19351forward

Expression of CNT30103876

Peptides detected in this lncRNA

>peptide 1 (45 aa)
WLVNEQDMTKLGWPVAHPRFMRRPSARTMMPVLVSRPSMSISLSK*

>peptide 2 (78 aa)
MLQTMALFFIFLMWSTIMMSLLPVVVTKMSASETTSSKVRTWRPSIRAWRAQMGSISVTMTRAPACLRAAAQPLPTSP*

Sequence

>CNT30103876
CTGGTTAGTGAATGAGCAGGACATGACAAAACTGGGGTGGCCAGTAGCGCACCCAAGGTTCATGAGACGACCCTCAGCAAGGACAATGATGCCAGTGTTG
GTCTCAAGGCCGAGCATGTCAATCTCATTGTCAAAGTGACCAATGTTGCAAACGATGGCATTGTTCTTCATCTTCCTCATGTGGTCAACCATTATGATGT
CCTTGTTGCCAGTGGTGGTCACAAAGATGTCAGCCTCCGAGACAACATCCTCCAAGGTGAGGACCTGGAGACCCTCCATAAGGGCCTGGAGGGCACAGAT
GGGGTCAATCTCAGTAACAATGACACGGGCACCAGCCTGCTTGAGAGCAGCAGCACAGCCCTTGCCAACATCACCATAACCGCAGACCACGGCAACCTTG
CCAGCGATCATAACATCGGTAGCCCTCATGAGACCATCAGGGAGAGAGTGGCG