Detailed information on CNT30103811


BLAST search results

BLAST vs Swiss-Prot:
sp|P68172|SAHH_NICSY, E-value = 7e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675951Oryza rufipogonSetaria viridis29.162.0889.26149forward
CNT30639580Oryza rufipogonNymphaea colorata21.6824.4583.78111forward
CNT3076639Oryza rufipogonBrassica juncea21.4817.2184.55110forward
CNT30612366Oryza rufipogonArabis alpina18.5535.0683.1695forward
CNT30601056Oryza rufipogonFraxinus excelsior25.7824.482.58132forward
CNT30651401Oryza rufipogonRosa chinensis16.631.7283.5385forward
CNT30680065Oryza rufipogonTriticum urartu26.7636.1590.51137forward
CNT30573685Oryza rufipogonVitis vinifera16.2121.2885.5483forward
CNT3026673Oryza rufipogonPopulus trichocarpa26.7614.585.4137forward
CNT30578287Oryza rufipogonOryza barthii10097.15100512forward

Expression of CNT30103811

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MANFKLTLLMPQPLVVLVSLRLGELGQPGTKLAQVEGGHLLVEVLGKNVHLLLVLASALLLPQLKL

Sequence

>CNT30103811
ACGAAACAGGCATACAATCCAGCACAACGAGCAAAACTATCTTTAAAGGCAAGAATATTATTCATAAATGACGCATGATTTTTATCAAAACGCTTGCAAA
TGATATCAGATAAGTAGAGTCAACAAGACAAAACTGTATCTGCCAAAGCACACCTCCCCAACTCCACCCAATTACGCCATTATTTCTGGGCAAAAGCAAA
CGGCTTCCCATTCCTCCCCTTCACCAGTCTCAAACCATAAACCCCACAACAAATCCTCCTAAGTGACGGCATATAAGATGATGAAAACAAAGCAGGATAC
TCCAGAGTCGTCATGGCGAACTTCAAGTTGACACTTCTCATGCCACAGCCGCTAGTCGTGCTGGTCAGCCTGCGACTTGGAGAGCTTGGTCAGCCTGGCA
CCAAGCTTGCCCAAGTGGAGGGCGGCCACCTTCTCGTCGAGGTGCTTGGGAAGAACGTACACCTTCTTCTCGTACTTGCCAGTGCTCTTCTCCTTCCACA
GCTCAAGCTGAG