Detailed information on CNT30103796


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108916Oryza rufipogonOryza longistaminata40.5219.7797.84139forward
CNT30117668Oryza rufipogonOryza nivara18.0830.2410062forward

Expression of CNT30103796

Peptides detected in this lncRNA

>peptide 1 (47 aa)
ARLVGRQAAAGCRLGAPDLTGAGRQAPRTGPPSAARRGSGHCRRAGP*

>peptide 2 (77 aa)
ATRGAAGGCRLPAGRTGPDRRRAAGPTNRSAIRGASRLRPLPTGRAVAPSAATRHLAISLSVVPMPLIIICYGFKLC*

Sequence

>CNT30103796
GCGCGACTCGTGGGGCGGCAGGCGGCTGCCGGCTGCCGGCTGGGCGCACCGGACCTGACCGGCGCAGGGCGGCAGGCCCCACGAACAGGTCCGCCATCCG
CGGCGCGTCGCGGCTCAGGCCACTGCCGACGGGCAGGGCCGTAGCCCCCAGTGCAGCAACGCGTCATCTCGCCATCTCTCTGTCAGTAGTTCCAATGCCG
CTAATCATTATTTGCTACGGATTTAAATTGTGTTAGTGTGACTTGATCAATAGAGCTATAAGGTCACCCTGGTACTGTTAGGCATTTAGGCCGGCTTGCC
ATTGGTCAAGAATCTAGAGGCATTAATCCCATTCCCATATTGT