Detailed information on CNT30103759


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597068Oryza rufipogonOryza meridionalis79.7410097.57370forward
CNT30371181Oryza rufipogonOryza glumipatula19.8320.0410092forward
CNT30575078Oryza rufipogonOryza barthii94.427.8694.52438forward
CNT30116518Oryza rufipogonOryza nivara70.4751.7498.78327forward

Expression of CNT30103759

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MTPMHSLGVCTKAICTRNYLYFLYNESIVFMFELKV*

>peptide 2 (31 aa)
MLNLILESQALCSSIVLFAKIMTFQFVINYL*

Sequence

>CNT30103759
GGGCTAAAAAGTCCCATTAACCAGGAAGCTTGAAGGATACTAATATTAGTAATTCCACAAATGACACAATAGATATGCTACAACTTTGGCTCCACTTACA
CTATCCTGTATATGACTACAAAACTGCAGCTGTGAGAAGATAGAATGTCATTACTTCAAGGGATGTGATGCGATGCTGAATCTAATATTGGAAAGTCAAG
CCCTTTGTTCTTCAATTGTCCTATTTGCAAAGATTATGACCTTTCAATTTGTCATCAATTATTTATGACACCAATGCATTCTCTTGGTGTATGCACCAAA
GCAATTTGTACGCGGAATTACTTATATTTTTTATATAATGAAAGCATTGTGTTCATGTTTGAACTAAAAGTCTAACAAACTGAGGTTTTAGTAGGGGATG
CTTTGCATTGATAATAAAGTACCCATTACTTTGTAGTTACATGGGATATTTGTTACATAGGATG