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Detailed information on CNT30103688

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696656	Oryza rufipogon	Oryza sativa	29.25	81.53	100	234	forward
CNT30555137	Oryza rufipogon	Oryza glaberrima	53.5	100	93.93	428	forward

Expression of CNT30103688

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MTDICSCGMAMPMGIIMLPIRLITCTCACSCFR*

>peptide 2 (77 aa)
MHGRVSAGLAHVHHAEADLSHLGHLGHDGHLQLWHGHAHGHHHAAHPAHHLHLRLQLLQVVDHLVKHRRLVSLDKRTT

Sequence

>CNT30103688
CTGAGCTCCAGTGAGTACTCTCTACATTCATTTGCCGGCAGACATGAACAGCGGAGACGAAAGTCAGACAAGATGATGAATTGACCCCCACCTGGTCCAT
CAGACCAAAGTGCAATTGCTTGCCTCTACAAAAACACAGCTGTACATGACCATCTGCCGGTTTATACAGGTCAAGACAATATAAATATACTGTGCACCTC
TAAAGAAAAGAGGGTAGAAAAATATACACCATGCCACGGTTGTTGTGACGCCGTACTATTTCATATCTAACCACAAGATTAGGAATTTACTCCCTCCGTC
TTAAAATATAAGCATTTTTAGCCGTTGTCCAGATTCATAGCCAAAAGTTGTTATATTTTGGGACGGAGGTAGTAGGCAAAATAATATTCAGTGCAAATAC
AACAACTAGCATTTTACATGTACTACTTGTAGTAAGTACCATGTCACGATCATTGTCTGGAGTTGCTTGGCTGGTCCTGCTGCTGCTGCTGGTGGTTTAG
CTTCTGGTACATTGCCATCATCCGGTTGTACGCCTCCATGCCGTTCGGAAAGGGGGCGTGTGCATATGCATGGGCGCGTATCCGCCGGCCTGGCCCATGT
TCATCATGCTGAGGCCGATCTGAGCCATCTGGGCCATCTGGGCCATGACGGACATCTGCAGCTGTGGCATGGCCATGCCCATGGGCATCATCATGCTGCC
CATCCGGCTCATCACCTGCACCTGCGCCTGCAGCTGCTTCAGGTAGTCGATCACCTCGTCAAGCATCGACGCCTTGTCAGTCTGGATAAACGCACCACGG