Detailed information on CNT30103563


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30111489Oryza rufipogonOryza longistaminata23.8818.9385.9464reverse complement

Expression of CNT30103563

Peptides detected in this lncRNA

>peptide 1 (29 aa)
RRSPAAARRARRQRKLRRPNLCRLARRGG*

>peptide 2 (69 aa)
PTIAGGGEARAQATQIEAAKPLPACATWRVSPRTGRWTCSICCCSAVAMASGRLELAPRRSSAESRGAT*

Sequence

>CNT30103563
CCGACGATCGCCGGCGGCGGCGAGGCGCGCGCGCAGGCAACGCAAATTGAGGCGGCCAAACCTTTGCCGGCTTGCGCGACGTGGAGGGTGAGCCCCCGCA
CGGGGAGGTGGACGTGCTCGATCTGCTGCTGCTCCGCCGTGGCCATGGCTTCCGGCCGGCTCGAGCTAGCTCCTCGCCGCAGCAGTGCAGAGAGCAGAGG
GGCGACGTGACGGTGGTGGGAGTGTGAGGTGGGGGATGCAAATCCACTGCTGTACTGCACCTGCCGTA