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Detailed information on CNT30103517


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT007284, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597026Oryza rufipogonOryza meridionalis14.9910099.07322forward

Expression of CNT30103517

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKPLPLLSPLHLVTHSASFFDLSKGGLLL*

>peptide 2 (49 aa)
MEQTKVEDLDSLQFGFNPMELSSKHIFRRQSFLPYLNPAFTWRFGMRFL*

>peptide 3 (35 aa)
MVFDNANPCSKQRSKLATLYSASVLICIDAPRSFF*

>peptide 4 (31 aa)
MLSFLTHPVVEGVLLPVSLTSAFPSLEQLCR*

Sequence

>CNT30103517
TACGCTGCAGTTAGATTAGGAACCGTATAGGCGGCCTCATATACCCGGAAGCTTTGGATTCACGGATCCGAAACAAGACATATTCACTGCTACTGATATC
CCTCCCTTTGCTTTGAAGCCGAAGATAACGATAGGATTTCCGGAACCGAAACTATTATTAATTATAATTAGATTGCGAACTCAGGAGGGCTTAGTACCAG
CTACAACTATCAAATCCGTTAAGGAGCAGATCAATTGGCTTAGCCGAAACCGTGCCCTTATCTTTTCTTTGCATTAGCCGAGGACAATACTAGGGATGCG
GGAAGTTCCGAGAATAGGATTCGATTCCCCGATCTTCTAATTGAGTTGGATCGGCCTAGTCCAGAGGGAGAGGAGCAATCAACGCTAATTCGTATTGCGA
TAAATCGTAGTCATATTATTATTATTGGCGTACGTAATTTCTTTACTACGTCTATCGCTCGTAGGAATATCTCTAAATAGGAATCGTAGTCCTCGTATGT
ACATGTTTCGTATTGTGATAAAGCACCTATGCCGCTAGAAATAGTAGCGCCTTAAAGAAGGCGTTATTTACAAGATGGAATAGTGCTACGTCATAAGCAG
AAAGACCACAAGCCATAAATGGGTTACCTAGCCACATAATTACAGACAGGGACCCAACTCTTAGGCCAGTCCGAAGGGCATTGATGGAACAAACAAAGGT
AGAAGATCTTGATTCTCTGCAATTCGGCTTCAACCCGATGGAGCTCTCTTCAAAACATATCTTTCGGCGTCAGTCTTTCCTGCCTTACCTTAACCCCGCT
TTCACGTGGCGATTCGGTATGAGGTTTCTCTGATCTGTTTACGGTATTCTTGAAGCTTTCTTTCTTGGTCACCGGACAGAGTGAGAACTGCTCTGCTTTC
TTTCCCTAGCACACACTTAGTAGATAGTAGGCACAACTCCGCTAAGAGCTCATCGAACTTGAGTTCTAGAGTAAGACCACAGCTCGATATGGCTCATTCA
CTAGTATGGTTTACCACATGCCAGTGATAGATCTCTCTCAAGCGAGGTTTGGTATCGGTGAAGTCAATCATTGAATTGAAGTGGTAGAGTGCATAGCGGG
GCATAAGGCCCCATGTATTTCTTATCAGTGTGTTTATACCTTGAATTCAATTGATGCTGTTCTAGCTTGTTTTAAACAAGTTATAGAGTTTGTTTTGGTT
CCAGGTGGTCATCCCAACTCGTATTAGCTATCGAAAAGCCGTACTTACTTGAGTTTCCCGCTTTCCATAACGAATCCCCCGCTGAAAGCACCACAGGGAG
TGTAACCGGAGGAGGATGTTGTCTTTTCTCACTCACCCAGTAGTCGAGGGTGTATTATTACCCGTTTCACTGACATCTGCCTTCCCTTCTCTGGAGCAGT
TATGTAGATAGGAGTGGTAGGAATCAGCGAGCATGTTGCCATTCGAGGTAGTCCAACCTTCCTATTAATTAGAATTCTGGGTAACCCTATCGTTGATTGA
CGGATCGGAGGGACTAAACTGTTCCCTTTCCTTCCCAGGGCTAGGTTATCTATTTCCTGTTCGTGCTGCGCCATCAGATTAATCGTATCGTGATCCTGGT
ATCGCTCGAGCATCTCTTTCTGATGAAACCTTTGCCCTTGCTTTCTCCACTACACCTGGTAACGCACAGTGCTTCTTTCTTCGATCTATCCAAGGGAGGC
TTATTGCTTTAAGCAGAGTATCCAGTTCTGCATCCGTTAATGATTTCTGAACATAGAGAAAAGAATTGATAGCTAAAGTTTGCTTTTAGTAGTTTAGTCA
CCAATCAAAAAAGTAGCTAGGCTGAAGCCGAAGCACATTCCCTAGCGTACTAGCGTACGAGAGAAGCACATTCCCTAGCGTACGAGATATGCCTTTTAGG
AAAGAGATCCCTTTTATGAGCAATGGTTTTTGATAATGCTAACCCCTGTTCAAAGCAAAGGTCGAAGCTGGCCACCCTTTACTCGGCATCCGTTCTCATA
TGCATAGATGCTCCGAGAAGCTTCTTTTAGTTAGCCAAGCGGGTCATGTGGATGGGTCAAGAGATGCGTAAACGTGCCCAACAAGGGGTAGGTGTGGTAA
AAGGGTATGCGGGTTGATGTGTCCTTCACCTTGCTAGTAAGAGTGGTA