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Detailed information on CNT30103503


BLAST search results

BLAST vs Swiss-Prot:
sp|P16146|PZ02_LUPPO, E-value = 4e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520536Oryza rufipogonSetaria italica14.0620.6695.36151forward
CNT30554955Oryza rufipogonOryza glaberrima89.297.7696.24958forward
CNT30150787Oryza rufipogonBrachypodium distachyon7.4521.8696.2580forward

Expression of CNT30103503

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MLRRRSLASTEAWSGPREAALSGKLSRAASPRRRYAAWS*

Sequence

>CNT30103503
TTTTAACAACGACGCTAAATAATAATAATAGTAGTAGTAGAGGTAATTCACATTACAAGTTCTTATAACACGCTAATAATATTACAAGACATAATAATAA
TAATGCTACTACTACTGTTTACAACCTGTAAGATCAGCAGTAGAAGGTAATAACAGACTTTAGAAGAGCAATGGACGCCACGGCCGGAGTAACTGACCAG
TGACCGGCCACCGGAGACGCACGCCGGACACAAAAACGCCGGCTGCCGGTAGCATCGGCGTCTCCGGTTGAGGAAGAACACCAACCAACCCTAGCATCTA
CAGAGGAAACAAGTCCGGAGAGAGATCGATCTACGTACACAAACGAACCAAACCAAAAGGATTAGGGACTATAAAACTGCTAATCCATGCCCGTCCGTGC
GGTGCAGAATGTCTAAAATCCCATCTGCACGGCGGCGGCGGCGGCGACGATTAGGCTAACGACGGCGTGAGTACTAGCCAAGAAGTGGTGGTGGTGTTAA
TTGGCGGCGAGGAGGGAGTCCCAGTCGATCTCGTAGGACGGGTACTTGGTGAGGGCGAAGGCGGCGGCCTCGTCCCACGGCGCCTCGCTGAAGTCGAGCT
GCTGCATCTCCGGCACGGTCGCCGGCGTCTCGGCCGTGGTGGCGGCGGAGGACGGCGACAGGGAGGGCGACGAGTCGGCGGACTCCAGGCAGGACGACGC
GTCGTCGGAGGACGGCGACGAGCAGTTGCTGGTGGGCGCGGAGGATGTTGCGGCGGCGGAGCTTGGCGTCGACGGAGGCGTGGAGCGGGCCGCGGGAGGC
GGCGTTGTCGGGGAAGTTGAGCCGCGCCGCGTCGCCGCGGAGGCGGTACGCCGCCTGGTCGTAGGCAAGCGCCGCCTCCTCGGCTGTGTCGAAGGTGCCG
AGCCAGAGCCGCGTGCGGTTCCGCGGGAGGCGGATCTCCGCCACCCACTTCCCCCAGTGCCGCTGCCGCACGCCGCGGTACAGCTTCTGCGGCCGCGGCG
GCGTCGCCGCCGCCCCCGCCGCCGAAGCCGACGACGACGACGCCTTCATCGGCTGGGCGCGCGGGGCGAGCGGG