Detailed information on CNT30103321


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554795Oryza rufipogonOryza glaberrima91.710097.85652forward

Expression of CNT30103321

Peptides detected in this lncRNA

>peptide 1 (44 aa)
HPLCSGEITDSSSHRASARTPFAVTPPRALSPPPLAALFPRTEQ*

>peptide 2 (37 aa)
MSAVVSLLNGSIGRLGGLLLIWILTMEEASRELARER*

Sequence

>CNT30103321
CCACCCTCTGTGTAGCGGTGAAATCACCGATTCCTCATCCCACCGGGCGAGCGCGAGAACCCCTTTCGCAGTAACACCGCCTCGAGCGCTATCCCCGCCA
CCGCTTGCCGCGTTATTCCCGCGCACAGAGCAATGACACCGGATGATGCGCCTCCTCGCGCATTGAATACCAGTGCGCACATCCTCCCCTAATAAGTAGT
GGCCGCAGGCCGCCGGTCATCTCTTCCGCCGTCGCGTGAAGGCTCGGTGTCGGGGAAGGCCACACCTGCGGGAGAGGGGCCTAGGGTTTCACGAGAGCGT
GTGCTGGTGTGGCGTCGTGGCAGTGGCCAGATCAGAAGCTAGCCGGCCGTGGTGGAGTTCGTAGTGTATCTTGGCCGCTCCGTTTCGTTGCATGTCGGCC
GTCGTTTCACTCCTCAATGGCTCAATTGGAAGGTTGGGGGGGCTGTTGTTGATTTGGATCTTGACAATGGAAGAAGCCTCAAGGGAGCTAGCGAGGGAAA
GGTGATCTTCAGAAGAGCTGAGTAAGGCTGCAGCAGAAGGTTCATTTTCCCTTTTGTGAGGTGCCATAACTTTCTGGTGTCTGTTGAAGGACAAAGATTA
TAAATGACATATATTGCAGGAAAATGACATATTTTGAGTGTTTTTATATGTTGGAAACGTGCATTGCACGTGCACGATTACTAGTATGTTTCTAAAACAC
CACCTTTAATA