Detailed information on CNT30103291


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696231Oryza rufipogonOryza sativa27.6236.96100901forward
CNT30554856Oryza rufipogonOryza glaberrima22.2647.2794.21726forward
CNT30370995Oryza rufipogonOryza glumipatula28.4860.7293.97929forward
CNT30106300Oryza rufipogonOryza longistaminata20.8891.999.71681forward
CNT30577742Oryza rufipogonOryza barthii27.9941.6593.98913forward

Expression of CNT30103291

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MASIRILFILCKSNLTLPGNMCDIFLLSSK*

>peptide 2 (29 aa)
MFKLDRKSDHAFGKEKQIRVIVYFMMAYL*

>peptide 3 (31 aa)
MCFSWSTNTVSIFIYQILILLHQLMLYDIEV*

>peptide 4 (33 aa)
MILCGACNSCCVSFSIPTSASIVFKFNFRMVDH*

>peptide 5 (39 aa)
MPRKKCALNIKHHIQRKGTCYVPSLNLERLLIFSKIVVL*

>peptide 6 (60 aa)
MGRIVDVFVARNQMCQRLEKRGIVSIAFYLMFWTSSQSPKIKRYCFIITCSNYIYNYRNC*

>peptide 7 (61 aa)
MTKEIDSFIACLTYNHMQVKKISSVPSFRSLQVRGILGIRSIWNQSPRQSWRTIKKSNRYI*

>peptide 8 (46 aa)
MYVVWRKHHWCGDGVMKCMTECFNYFICPKKKDTYILFITVVRICY*

>peptide 9 (56 aa)
MSCKTAIVDGFCDSVLYGSHLFTYAYAYQPKFEFSTLNLELILGFFHRSLFFSFCF*

>peptide 10 (66 aa)
MILRFDCTILGCHFLYEKGGSNLEQISRGQRTSLEHGYSKKMKKKIDTKQPRLPRKLTLMCYFEVL*

Sequence

>CNT30103291
TAAATTTATAATGCAATTTCATCTTAATTGGATGGGTAGACTTAAAATGAATAGTCTAGTATTTACCAAATGAAATAAAAAAATGATGTCTTTAAAAATG
AAATTTACATTTGAACGTTGTATTTTCAATTTCAAATATGACAATATTCCCAAAAAATTTCAAATATGACAAAAGAAATTGATTCATTCATTGCTTGCCT
TACATACAACCATATGCAAGTGAAAAAAATATCTTCTGTTCCTTCTTTTAGATCATTACAAGTAAGAGGGATATTAGGCATTAGATCAATTTGGAATCAA
TCGCCTAGACAATCTTGGAGAACCATAAAAAAATCCAATCGATATATATAGTTCTTTTTCTAAAGAAATAATGATTAATAATATTATATTGTCTTGCAAT
TAAATGGTGGGCGAAAAATTTGGTGTTAGCTATTCATTGGAGGGCAGAAACATTTCCACACAAGGCTAAACATAGATGGTCCTGAATCATCTTTGATTCA
TGAACTTTCTGATTTTATGTGTTGGTATTATTTGGTGGTTATCATGATGTGGTCATGTCATGTAAAACTGCTATAGTTGACGGTTTTTGTGATAGTGTAT
TATATGGGTCTCATCTTTTCACTTATGCTTATGCTTATCAACCAAAATTTGAATTTTCGACCTTAAATTTGGAGTTAATTTTGGGGTTTTTTCATCGAAG
TTTATTTTTCAGCTTTTGTTTTTAGATCGCTTAGAACACGTATATAAAAGTTTTATTCACAAATTATTTTTCGTTTGCAAATATGCCGTTTCGCTTATTC
CCCGAATAAGCGAAACGATGGGTCGCATAGTAGATGTTTTTGTAGCTCGAAACCAGATGTGCCAAAGATTAGAAAAAAGGGGTATTGTTTCCATTGCATT
TTACTTAATGTTTTGGACATCGTCACAATCTCCAAAGATAAAAAGGTATTGTTTCATCATTACTTGTTCTAACTATATATATAATTATAGAAATTGCTAA
AAATATAACTATATGAATGTGTTTTTCATGGTCTACTAATACCGTTTCCATTTTCATATATCAAATCCTAATACTTTTGCATCAATTAATGTTGTATGAT
ATTGAGGTTTGATTGCACCATTCTAGGATGTCATTTTTTATATGAGAAAGGAGGGAGTAATTTGGAGCAGATCAGCAGAGGACAAAGGACTAGTTTGGAA
CATGGATACAGCAAGAAAATGAAAAAGAAAATTGACACCAAACAACCAAGACTACCCAGGAAATTAACTTTGATGTGCTATTTTGAGGTCCTATAAATCT
TTTTATTGCTTTTGAAACCTTGCAAGAAGAATTTAAGTTGGCATCTATCATTTCATTAGTTTTCTACAAGCCAAATAATGTAAAAACTCAAAATTGTAAT
TTAGTCTGTAGTTCTCATATGTTCAAACTGGATCGGAAAAGTGATCATGCCTTTGGGAAGGAGAAGCAGATACGGGTTATAGTATACTTTATGATGGCAT
ATTTATAGAATAATTCCAAAAACCACATGTACCTAAAATATATATGGTGATGTTCACGTAAATGTGGCGGGGGTGAATCATGGGCGTTGGAATATAGGTG
AGGAGAGGAGGATAGGAAGGAGCTGAAGAGGAAAATTTTGATAGATGGGGATCAAAAGATAGTTCTAAAACTGTTAAGCGTGGTCCAATTAATTCTGTAT
GAACAAATGTACCATAAAATTCTCTTGAACACAGCCATGTAATTAATAATTAACCCCTGAGACAAATAATTACTGGAGGTTTTTGACAAGGCATGGCGTC
TATAAGGATACTGTTTATCCTCTGTAAATCAAATTTAACCCTACCAGGAAATATGTGTGATATATTCTTGCTATCTTCCAAGTAAGAAAAAAGACTGCTC
ATTTCTTGGGTTACACTATTTTCATTATTTCTCCCTTTCTATTTTTTTAGTTATAGCTGAATGGGGCGTCATTTGCAAAACGTCTCCATCTCAACTGAAA
CAACAGTCGCGCGTTTGGGTCAAGGTAATTAAGGATGGTTTGCAAAATCAAATGTGTGTATTTGTCATATTCTGCAAAATGGACTTCCTTCAATAATGTT
TAAGTTTTCAATGTCCTCCATTCATGCATAATTTGATCAGGTGACAGGTGTTCTATATCGTCAGTAGCGATTGTATAGTGGCTGGAAGACAAAGAAAGCT
CTCTGCGCATTGCTTGTTGTATATGTTAGGTATGAACAACTGCTTGGATTATTTCATCATTTATGATGTCAATATCTGTCTATTAGGTACTTAATTTTGC
AACACATTATTGAAAGAAACGGCGTTTTTGGAACAGGATTACGGAAAGGTGCGACTGTAAGAGTGCTATGATCCTGTGTGGTGCCTGCAACTCATGTTGT
GTGTCATTCAGCATTCCTACTTCTGCATCAATTGTTTTCAAGTTCAATTTTAGGATGGTAGACCATTAGTGGCCGCCAAAAGATATTAGCTACCTATCTG
TATAATTTAATCTGAGATGTAAAATGGAAAAAAAATAATTAACCACATAGAAAACGCGCGCCAGCAAAGCTAAGTTTATTAGTAGGAACTTGTTTCCATG
CCTAGGAAAAAATGTGCACTGAACATTAAGCATCATATACAAAGAAAAGGGACATGTTACGTGCCTAGCTTAAACTTAGAACGACTGCTCATTTTCTCAA
AAATTGTTGTATTATAGACTTCTGGTAGCTAGTGCCCTAAATTAAACAGAACTAGTGAAACATGCTTGTTAATCACACATATTAGTTTGAAGCCAATTAC
TAATGTATGTCGTGTGGAGGAAGCACCATTGGTGTGGTGATGGCGTCATGAAATGCATGACTGAATGTTTTAATTACTTCATTTGTCCCAAAAAGAAAGA
TACATATATCTTGTTTATTACTGTTGTACGTATCTGTTATTGAATGGAATTCTGAATAACATGATCCACTTTGTTGTACATGTCTTACTACATCATCTCT
TGATGTGTCGATGGTGAATCTGGCAAGTAAAATAACCTGGTATTTATGACTTTATGTTTGTTTCTCTTGAAGAATTTTGACACGTTGGTATACGTACCAT
AAATGCCAACAAATTAAGAATTCTTCTCTGGGCTGCCCAGAAATCATTGCCAGTTTTATTACGACAATTCATTCTCCAGTCTGTACTCTGTTAATTTTAC
ACTGTGGAATCATCACCATGTAAATTTTGGACATGGCTGTATTTATCTTTCACCTTGTGAAT