Detailed information on CNT30103287


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371004Oryza rufipogonOryza glumipatula86.4230.299.4331forward
CNT30577684Oryza rufipogonOryza barthii74.6761.7798.95286forward

Expression of CNT30103287

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLNTTTFLAFHRCRVTPHIAAIFHVLLVTHSLTNNRLS*

>peptide 2 (44 aa)
GILLCEHCSGFLAGPVRCGGSTILRQHRLLCSTPQHSLPSTDVG*

>peptide 3 (53 aa)
MRKNNTVASCIIPSCAKTSTVIEHEVSLSSNMVWKPSISSFFASSAQLAAFTEP

Sequence

>CNT30103287
TGGTATTTTGCTGTGTGAACACTGTTCAGGCTTTCTTGCAGGGCCAGTAAGGTGTGGAGGATCAACGATCCTACGGCAACATCGATTATTATGCTCAACA
CCACAACATTCCTTGCCTTCCACAGATGTCGGGTAACACCACATATAGCAGCAATTTTTCACGTGTTATTGGTCACTCACTCACTAACAAATAATAGGCT
CTCGTAACGCCAGCCAGGTCTATGAGAAAAAACAACACAGTGGCATCTTGCATTATTCCCTCGTGTGCCAAAACAAGCACGGTGATTGAACACGAAGTAT
CTCTATCAAGCAATATGGTGTGGAAGCCGTCAATATCTTCTTTCTTTGCTAGCTCGGCACAATTGGCTGCATTTACAGAACCT