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Detailed information on CNT30103134

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30695763	Oryza rufipogon	Oryza sativa	99.82	91.91	99.82	568	forward

Expression of CNT30103134

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLKEEEVVLVPQAHASIIRSCLSAIFEAMKY*

>peptide 2 (97 aa)
AASPCLPDPHLERRIELPPVAPPCRRVDARLLAPLPPTLGAIESHVPTAGNALRSLHPMAPASSSLPMPVAHVEGRGGRARAASPRIHNTFLPVCYL*

>peptide 3 (50 aa)
MSSCRRAVARAAPSDPWRHRVSRSNGRQRAPLPPSYGAGVELAPHARGPC*

Sequence

>CNT30103134
GCGGCATCTCCTTGTCTTCCCGATCCACATCTAGAGCGCCGCATTGAGCTGCCACCCGTGGCTCCGCCATGTCGTCGTGTAGACGCGCGGTTGCTCGCGC
CGCTCCCTCCGACCCTTGGCGCCATAGAGTCTCACGTTCCAACGGCCGGCAACGCGCTCCGCTCCCTCCATCCTATGGCGCCGGCGTCGAGCTCGCTCCC
CATGCCCGTGGCCCATGTTGAAGGAAGAGGAGGTCGTGCTCGTGCCGCAAGCCCACGCATCCATAATACGTTCTTGCCTGTCTGCTATCTTTGAAGCGAT
GAAGTATTAGCTCGCGAGCTCAACGAGCTGGCTCGAGTTTCATACCGAGCAGAGCCGAGCTGCCGTTTAAGCTCGTTAGCCATAACGAGCTAGCTCGAGC
TGGCTCGTTAACCTACCGAGCCAAAGCGAGCCGAGCCGAGCCGAGCTGGCTCGATATCCACCCCTAATCTCGCAGACGATAACTGTATATGAGTTCCAAC
AGATGGCTAGGGTAGAAGAAGAAGACAAAGTTATTTTTTCCCTCTTGTAATCCATTATTTGCTTTTGTT