Detailed information on CNT30102993


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104774Oryza rufipogonOryza longistaminata60.6996.7795.71210forward
CNT30577355Oryza rufipogonOryza barthii82.6610099.65286forward

Expression of CNT30102993

Peptides detected in this lncRNA

>peptide 1 (96 aa)
QLKKLKERKETQLIIPRLQAFLPSLLAVAFHHLRHLLLPSQDLFFGCRAERFAFLVGWLIDPVPGFGEELKVAPWRSSRFFDCLFDWWFLSEKRRD*

>peptide 2 (49 aa)
ATEKTEGKEGNAANYTAASGLPSFPTRCRLPPSPPPSPSLPRSLLWMPR*

Sequence

>CNT30102993
AGCAACTGAAAAAACTGAAGGAAAGGAAGGAAACGCAGCTAATTATACCGCGGCTTCAGGCCTTCCTTCCTTCCCTACTCGCTGTCGCCTTCCACCATCT
CCGCCACCTTCTCCTTCCCTCCCAAGATCTCTTCTTTGGATGCCGCGCTGAAAGATTCGCTTTCTTGGTTGGTTGGTTGATCGATCCGGTGCCCGGATTT
GGGGAGGAATTAAAGGTGGCGCCTTGGCGAAGCAGTAGATTCTTTGATTGCTTGTTTGATTGGTGGTTCTTGAGCGAGAAGAGAAGAGACTGATTGATTG
GTGGAGAAGCTGTGAGGTGGGGTTTGAAAGGAGGCGCGTTCTTGTG