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Detailed information on CNT30102905


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT007011, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596994Oryza rufipogonOryza meridionalis37.0612.9597.7305forward

Expression of CNT30102905

Peptides detected in this lncRNA

>peptide 1 (45 aa)
LYFERYFNFRIFAGWRILLRQPQKLVSDDVKSYSVLTVCLTYLSF*

>peptide 2 (29 aa)
YTSRDILTLGSLQGGESYLDSLRSLFQMM*

Sequence

>CNT30102905
GTTATACTTCGAGAGATATTTTAACTTTAGGATCTTTGCAGGGTGGCGAATCCTACTTAGACAGCCTCAGAAGCTTGTTTCAGATGATGTAAAGTCCTAC
TCGGTACTCACCGTATGCCTCACCTATCTGTCTTTTTAGAAGCAACTTAAAAAGATATTCCAAGTCACACTTGTTCTAGCTAAGAGTTTATCGTCTCCCC
AGGCAGTTCCACCCGAAGGGAACACTTCTCTACGGATACCGATTCTCCAGACGCCTATGCAAGATGCAGGCTAAAAACGAGAACAAACCGAAGAGGTTTC
TCCTATAGGGTCCTTAGCATAAACACTTGTCTAGAACAAACGTGCAGGAAAACTTAAGGAAAATTACTTCATATTAAACAGATAAGCTTACATACGGTTT
TCCCTTTCGGGAAACCCGAAGGTAGTATAGGTTTTCTTTGGATTATATCTTTTTACATTTCTTTTATGTAAGAAGGGTGCTCTATTATCTGATCTTCTTA
AGAAATACCTTTTCTTTGTTCTAATATTATTATGGTTTCTATTTTGATGTTTATAAATTCTTTTACTTCTAGGCTTGTCTTCTCCATATGACAAGGGTAT
TTGAACTATTTTATTGCAGAAATTGTAATCCGAGTGTTTCATAGATCTTTGGGCTTGGATACCCGTGCATATTTTTCTTAGTTGCTTAAACATAAAAGTT
ATGGCTTGAGAGATGTTGATTTCAGCTCCTTCAGTTTCCTTTTTATATTCTTCAAATATCATACTTTCTAGTGGGTCAGGTAATTTATTGAAATAACGTT
CAACTATTCCCCTGTTATATCCT