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Detailed information on CNT3010282


BLAST search results

BLAST vs Swiss-Prot:
sp|P12360|CB11_SOLLC, E-value = 7e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515355Zea maysJuglans regia22.6520.8181.25128forward
CNT30609040Zea maysGossypium raimondii19.1223.4887.04108forward
CNT30115987Zea maysOryza nivara11.528.5195.3865forward

Expression of CNT3010282

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MMMSPMLLCHGSARWEARFSSGPKPTKASMARRPFLISLSLYSSNLAGSLEKPSGSKAPPGYFFFSGSFSMVRWCSAKSFRHQDPGDGKHGPAAVVHL*

Sequence

>CNT3010282
AAATAACCTTGGGATTCAGCTAACAAACCAGTTTATATTTGATACAGACAAGACTACAAGAGTAGCCGCTACTTAATAACATAAGCTTTACATTACGAGG
GTTTAATTTCCGGGCGGGAAGTCACCGTCGTCGCTCGTTGTACAGGCAGGGCCTAGTCGTACACAGGAAACAGCAACCAGCAGCTGAGCTGAGCTCAAGG
GGAGATTGATCTGGGGATGATGATGTCGCCGATGTTGTTGTGCCACGGGTCGGCGAGGTGGGAGGCGAGGTTCTCCAGCGGGCCGAAGCCGACGAAGGCC
AGCATGGCGAGGCGGCCGTTCTTGATCTCCTTGAGCTTGTACTCCTCGAACTTGGCGGGGTCCTTGGAGAAGCCGAGCGGGTCGAAGGCGCCGCCGGGGT
ACTTCTTCTTCTCGGGGTCCTTCTCCATGGTGCGCTGGTGCTCGGCGAAGAGCTTCCGGCACCAGGATCCCGGGGACGGCAAGCATGGCCCAGCGGCAGT
GGTACACCTCTGACTCCTTGAACCGCTCGAAGTTCTCCGGCACGGTCGCGAGGCCCAGCGGATCG