Detailed information on CNT30102799


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695362Oryza rufipogonOryza sativa45.857.88100158forward
CNT30596688Oryza rufipogonOryza meridionalis104.0666.691.09359reverse complement
CNT30604511Oryza rufipogonOryza punctata50.7233.5992.57175reverse complement

Expression of CNT30102799

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MITAQSNGGTTPSSLTYQRAWQPKTWITATRHHHDRPSPSPT*

Sequence

>CNT30102799
CGCAGAGATCAACACACCAATGCTAACAGATAAAGCAGCAATCAATAGATGTTACCACAGAGCCAACAAAGCAATTACTCAACGGTAGGTAAACATTAGC
AGCAAATACGGCTCCATAACAAGTTCACATAACTGAACCGACATGTCTTGGTGCAAAACTCTTGGTAAAACTAGGGATATAAGATGATAACAGCACAGTC
GAATGGTGGCACCACGCCAAGCAGCTTGACATATCAACGAGCTTGGCAGCCGAAGACATGGATCACTGCGACACGCCATCACCATGATCGCCCATCTCCT
TCGCCTACTTAGATCTCTGCCTCATCTTTCGGCGCTTCCTCTTCA