CANTATAdb - search

Detailed information on CNT30102748

BLAST search results

BLAST vs Swiss-Prot:
sp|Q7F1U0|PER22_ORYSJ, E-value = 1e-87

BLAST vs NONCODE: nothing found

Expression of CNT30102748

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MADEKALLNAALLEAKFLTVLSVLLPLKSTWSECRSPLLDSRLL*

>peptide 2 (48 aa)
MGFLICFKHFVLIRENTLSKHFRLVKYYYCDIYGPALFPNLCLLLYPV*

>peptide 3 (46 aa)
MSAWLSPLAANEAVRLATSKDGGGRSLFASAKLAVVESRLPRRTLHD

Sequence

>CNT30102748
TTATCATTCATGCATTCCTTGATAACTTCAAAACCATACTGATCGGTACATAACATGGGCTTCCTGATCTGTTTCAAACACTTTGTGCTGATCAGAGAAA
ACACTCTTAGCAAACATTTCAGACTAGTAAAATACTACTACTGTGACATATATGGCCCAGCCTTATTCCCAAATTTGTGTTTGCTTTTGTATCCAGTTTG
ATTCTTTACTTAATTATTAGTTCACTTTGGAGCAGCTAAGCCTGATCTGTCCCTGGCTCCCGGTGAGTGGTCCGAGGTTGGCCATCTTCACCATGGCCGA
CGAGAAGGCGCTGCTGAACGCCGCCCTGTTGGAGGCGAAGTTTCTGACCGTGTTGTCCGTGCTGTTGCCGTTGAAGAGCACCTGGTCGGAGTGCAGGAGC
CCCTTGTTGGACAGCAGGTTGCTGTAGTAGGCGTTGTCGAAGGAGTAGGGCGTCGTCGTGTCCAGCGCCGCCAGGTTGCCGTCGCCGCTGCCCGTCGGCC
GCGGGCAGCTGGCCTTGAGCGCCGCCGCGAAGGCGGCGTCGATGTTGGTCTCGTTGTAGAGCCTGTCGCGGAAGTTTTGGCACTGCGCCTGCCCGACCGT
GTGCGCGCCGGAGAGCGCCACCATGTCGGCTTGGCTCAGCCCCTTGGCGGCGAACGAGGCGGTGAGGTTGGCGACGTCGAAGGACGGAGGTGGCAGGTCG
CTGTTCGCCAGCGCCAAGCTCGCCGTCGTCGAGTCACGCCTCCCGAGAAGAACCCTCCATGACGG