Detailed information on CNT30102596


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694684Oryza rufipogonOryza sativa10088.6599.47375reverse complement

Expression of CNT30102596

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MAQHVPWLQLSVWHDTPSIIVYEPVERPDILHCLVKPSIVFLFESTF

>peptide 2 (29 aa)
QYHYFFSSVQLQRPQKLVTAQNLFWNSID*

Sequence

>CNT30102596
TCCAATATCACTACTTTTTTAGTTCAGTTCAGCTTCAGAGACCACAAAAGCTTGTGACAGCACAAAACCTCTTTTGGAATAGCATAGATTAGCTCGGTGT
TCCTTATCTGTTTATCCTAGTACACAACTACCTTTGCCACGATTCTGGAACACTCTGCATGTCTCACTGTTACTACAGAACTAAAATAACAATAGGGTAC
AAATAATTTGAACCAAAATTTAGGCAGCACAGATGGCTCAACACGTGCCCTGGCTCCAGTTAAGTGTTTGGCATGATACACCATCCATCATCGTATACGA
GCCCGTAGAAAGACCAGACATATTGCATTGCCTTGTAAAACCATCTATTGTTTTTCTTTTCGAAAGCACCTTTAG