Detailed information on CNT30102577


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520842Oryza rufipogonSetaria italica48.3827.891.04134forward
CNT30580219Oryza rufipogonEchinochloa crusgalli55.2316.8788.24153forward

Expression of CNT30102577

Peptides detected in this lncRNA

>peptide 1 (47 aa)
RTAPMPLPRGKRKQLGRSSMAAAVATMCMSSASSAGAMTTMFGRHAM*

>peptide 2 (91 aa)
EDGANAIAAGEAEAARAVVDGCGGGDHVHELGLVGGRHDDHVRQARHVGDVERAAVRGPVDVVHHLVVPSLQERRVDGAERLEPLGGEPRGE

Sequence

>CNT30102577
GAGGACGGCGCCAATGCCATTGCCGCGGGGGAAGCGGAAGCAGCTAGGGCGGTCGTCGATGGCTGCGGCGGTGGCGACCATGTGCATGAGCTCGGCCTCG
TCGGCGGGCGCCATGACGACCATGTTCGGCAGGCACGCCATGTAGGCGACGTCGAACGCGCCGCAGTGCGTGGGCCCGTCGACGTCGTGCACCACCTGGT
CGTACCCTCGCTGCAGGAACGACGAGTAGATGGCGCAGAACGGCTTGAGCCCCTCGGCGGCGAGCCCCGCGGCGAAC