| Target | Query species | Target species | Query coverage (%) | Target coverage (%) | Identity | Alignment length (nt) | Orientation |
| CNT30694985 | Oryza rufipogon | Oryza sativa | 103.85 | 91.97 | 89.15 | 378 | forward |
| CNT30244606 | Oryza rufipogon | Avena sativa | 16.76 | 22.59 | 95.08 | 61 | forward |
| CNT30668750 | Oryza rufipogon | Triticum dicoccoides | 13.19 | 23.88 | 93.75 | 48 | forward |
| CNT30445180 | Oryza rufipogon | Saccharum spontaneum | 17.31 | 28.38 | 95.24 | 63 | reverse complement |
| CNT30604390 | Oryza rufipogon | Oryza punctata | 67.31 | 99.59 | 87.35 | 245 | forward |
>CNT30102558
ATTCATGTCACAGGAATTCGTTTAAGTGGGTCGCTCTAGGATTGCAAACTCAGGTAAGATAACGAAAAACAGACACCGAGTACTTAGGGAGATAAAACTG
CCATAAGACAAAATTGCAGTGCAACATAAACACATGCATCACATTGGATTCAATGAGCATTAAGCAACAAAACTTGATTCAGCAGAAAGCCAATCCTTGC
TAGAGTACTTGAATACATGATATGGTCTGCTTAAATTAAGCTCCTAATAACATTGAAGTATGAAGCACAGTAGACCCACAACTTCAGTATCCAGTAGGTA
GTTTAGAAAAGAGATGTTCCCTTGCCCTTCTTGTCTCCACCAATCTCGAAATGCTTGCACCTCT