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Detailed information on CNT30102490


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695946Oryza rufipogonOryza sativa30.2225.2694.46505forward
CNT30596332Oryza rufipogonOryza meridionalis29.4473.7688.41492forward

Expression of CNT30102490

Peptides detected in this lncRNA

>peptide 1 (32 aa)
KLFLFSLSAMTGYCRHRPISLTRAPLTKSSRH*

>peptide 2 (28 aa)
MGSPIEWGVREVVCISGLARRMTIEPRFE

>peptide 3 (53 aa)
MRVAREHVSPPTSPPSGHRRADAPLTLSSLFSRLTVRQRKEETEEEEAKEKGS*

>peptide 4 (51 aa)
KALSLLSLSHDRLLPPPPNLPHQSSTNQILAPLASPRRVDSIFPLSPLPPP*

Sequence

>CNT30102490
AAAAGCTCTTTCTCTTCTCTCTCTCAGCCATGACCGGCTATTGCCGCCACCGCCCAATCTCCCTCACCAGAGCTCCACTAACCAAATCCTCGCGCCATTA
GCTTCGCCTCGACGAGTTGATTCCATTTTTCCCCTTTCCCCTCTCCCTCCACCTTGAAATAAACCACCACAGCCACTTCTTTTATCGCCGGAGTTGAGCT
CCTGCCGTCGCCGTTCCGGCCTCCTCCTTTGTTTCCTTCGCTAGCCGACAGCTTCTCCGGATGCGCGTCGCTCGGGAACACGTTTCGCCGCCGACGTCGC
CGCCTTCCGGCCACCGGAGAGCCGACGCCCCGCTTACCCTCTCCTCTCTCTTCTCTCGGCTCACTGTGAGGCAGAGAAAAGAAGAGACGGAAGAAGAAGA
AGCAAAAGAAAAAGGAAGCTGACAGGTCTTGAGGATTCTTCTGACACACTAGATAATATCATTCAATCTCAGGACATCGAGCAAGGCAAGTTACTATACA
CCTTTTGATCATTTAAGCCTATATTTTACAAATTATTTATTTATAGCCTTCTATTCAATATTCTATTTTCTATATGCATAAATCAATCATAGAAACCCAG
ACAATTTAGTATTGCTTATTTTGCTTACAATCTGCTTAAAATACCTCATACTTAGATTGAGACAATACGTAAGATTTGGTTGATTTCCGGGTGGCTAGTA
TTGTCTCAATCGATATAAGTTTTGCCAGGTACTTATGTCGAACGAACGGGTACGACCGCAGTTTCTAGAATGGGGACAGACCTAGTTATTATGTTAATTA
GCAATATGGCACCTCTGTATGGTGGTTCTTATTTTTAAGTGCGCTCCTCGCGCAGGAGGCAACTATAGCCGCGAAGGGCAAATTTAACCATTACCATGTA
CAGGTGAATGGTTTGTGATACTCGAGTATAAATTATATGGTATATTTCTAAACCCTGATCGAGATGACGTGGTGTCATACGATCAGTTCCCCTTAAATAC
CTCGGGAATGCCAGAACTTCTCTCGCTGCTGTTAACATTACGTTCAGAGCATATGAGGATATAAGTTCATGGAACAGGTGGGCCATGACTAAAGCCGATG
ATTATCAGCAAGTCGTGGACTGCGGGTAAAGCGTACATCTGCTGCAGTAGAATATCTTTGAAACTATTCGAATAGCCGTACTCATGGAATTTGGGTCAAG
AGGAGGACCCCTGTGATTATTATTACGATGACTCTGATAACTTAGAAAATTCCTAGAGGTTATACCTTTCTAGTCAGAATGTACTAGAACTTCCGTTGTG
TAATATTAGCACCTATGTAGGTGAGTACCTACCCTTGTAAAACCTCTAGTATTGTAAACTTTAACGTATGCAATGAAGAACCAGCTGTATTACATGTATC
AATATTTACTGATCCAGGGATTGATACATTAATTTTAGTCGGATCCAAGTTATTAGTTTTAGGACCCGACATTTAGCAAGAGCGGAACCAACTTATAAGG
ACTTGTTCCTCTAATCATGTCACTCCTGGGTTAACCCTTTTACACGAAACAAGGATAAAAGAGTAAGAGAGGTGGTATGTGTAAATGGGCTCGCCTATCG
AATGGGGAGTAAGAGAGGTGGTATGTATAAGTGGGCTCGCCCGTCGGATGACCATTGAACCAAGATTTGAG