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Detailed information on CNT30102464


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H5N9|PIP21_ORYSJ, E-value = 2e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Oryza rufipogonOryza sativa8.7829.1189.69223forward
CNT30671184Oryza rufipogonSetaria viridis5.6325.4488.81143forward
CNT30640614Oryza rufipogonNymphaea colorata5.0820.2883.72129forward
CNT30375565Oryza rufipogonArabidopsis thaliana2.4425.187.162forward
CNT3097560Oryza rufipogonSolanum tuberosum5.2721.4482.84134forward
CNT30289867Oryza rufipogonTriticum aestivum3.921.5290.9199forward
CNT30221191Oryza rufipogonHordeum vulgare4.2550.9487.96108forward
CNT30564991Oryza rufipogonActinidia chinensis3.2720.5487.9583forward
CNT30437070Oryza rufipogonAegilops tauschii3.9420.2490100forward
CNT30254684Oryza rufipogonAvena sativa3.94494.9599forward
CNT30659451Oryza rufipogonTriticum dicoccoides4.5332.0386.09115forward
CNT3012516Oryza rufipogonZea mays12.2422.4188.1311forward
CNT30227661Oryza rufipogonAnanas comosus4.5350.4482.61115forward
CNT30681057Oryza rufipogonTriticum urartu8.2620.6186.19210forward
CNT30346584Oryza rufipogonEragrostis tef8.2626.1586.19210forward
CNT30362596Oryza rufipogonSorghum bicolor5.2722.6794.78134forward
CNT30148622Oryza rufipogonBrachypodium distachyon7.3276.2388.17186forward
CNT30115855Oryza rufipogonOryza nivara5.3938.4888.32137forward

Expression of CNT30102464

Peptides detected in this lncRNA

>peptide 1 (48 aa)
WLCHAFSLLKMTAAPMLLAGLMPVPVIGIVARWTMNTAKPIGSGAKTW*

>peptide 2 (37 aa)
MRLLLSKRIYRIFFHCFSFLFVHICHSSDLNKLIFSY*

>peptide 3 (30 aa)
MARTRDTLRARKSPNVTAGLMCPPEMPAVQ*

>peptide 4 (58 aa)
MLVVRLKHLPSLKLQLSKHNFQREEKKKKNLGELAPMLLTGTCESRALRLGSVAEKTV*

>peptide 5 (42 aa)
MRIAIKLCNFRNFFFRKELRVFEGNYCFSSVQYALAFIKEDI*

>peptide 6 (62 aa)
MTCVGCLFSHMTHVYVLMVINISGLLGSKLVAKKPTSLLVTKCPFQQGTGNELARAPPNGCF*

>peptide 7 (71 aa)
MKIMPPNAHAMPSTPTPPHAASAPEADASVWCLYPITVATVMYRNSSVAMNSAMTARYSDHDPSSAASISGA

>peptide 8 (54 aa)
MVVPRLLVVEDDGRSDAPGRVDAGAGDRDRRQVDHEHGEADWQRRQDLVTSTHT*

>peptide 9 (51 aa)
MCANLQKQRSTAPPTLLHALSPPPKGRKKERKTLMSRCPPSLTQPHMFTTI*

>peptide 10 (52 aa)
MCRVSFQPHDPCIRFNGHQHQWTIREQVSGQKAHKPSCHEMPLSTRNWKRTS*

Sequence

>CNT30102464
ATGGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTGGCCGGGTTGATGCCGGTGCCGGTGATCGGGATCGTCGCCAGGTGG
ACCATGAACACGGCGAAGCCGATTGGCAGCGGCGCCAAGACCTGGTGACATCCACACACACATGAACAAAAAACAAAAAATCAGAAATTAGCATAGGTTT
GCAAGATGTTAGGCGAGTAACCAAACTATCTGTAGTACTGTTCAGCAACAAGTGTCGTTTTAACACAGTGAGTCAAGTGAGGCACAATAATTCACAAAAC
TGTGCTGCTGCCAAACCAAACCACACCCTGCATGACATGTGTAGGGTGTCTTTTCAGCCACATGACCCATGTATACGTTTTAATGGTCATCAACATCAGT
GGACTATTAGGGAGCAAGTTAGTGGCCAAAAAGCCCACAAGCCTTCTTGTCACGAAATGCCCCTTTCAACAAGGAACTGGAAACGAACTAGCTAGAGCAC
CACCAAATGGCTGCTTTTAGCCTTGGCTTAGTGCGCATTTCACCTCCTCCCTAAACACCAGGTCACCCAGGGCATATTTTGACAAGATGTGTGCAAATCT
GCAAAAGCAGAGAAGCACAGCACCCCCAACGCTTCTTCACGCCTTGTCACCTCCACCAAAGGGAAGAAAGAAAGAAAGGAAGACCCTCATGTCAAGATGC
CCACCTTCACTCACACAACCTCACATGTTCACCACCATATAAAGTGACCTATCCATTTCCCCTTCTCCAGAAAAAAGAAAAAACTACTACTAGTACTCCT
CTACAATTTCACCTAATAATATTTGGTCTTGTTTTTTAGTGAGGAGCTAGCACAAAACAACATGGCGTGAAAGGACACGAAATAGTTTTGGGAAAAAACA
GAGGGGGTGGTGAAGAATTTGTACTGGCGGTCCAGCCAAAATTCATCATGGAGATCACATGAAAACCTAGCCGCTGCCTGCACGGACCAGCTCACCCCCG
GTCTGGACCATACAGTACACCGGACCAGCTCAGCCTTTTTGGCTTTGCTAGGGCCACATGTAGTACGCGCGCGCCCGCACAGCCATGCTACCGTGATGGG
ATGGAACAGTAATAGTGGCAGACGTGACAAATGAGCTACAGTAAATAAGTTATAGGGTCCCATCGGTTGCCCTATTAAGCCGAAGCAAAAGCCAAAAATT
TAAATTTTTAATTTTAATTTTAAAGTTGATTTTAGGATATTTTGAACTTAGTTTTTTTTTATAGTATTAGCTTTTAAGTCAGCTAGAAATACATATATAA
AAATTTTAACTACAAATTATTTTTTATTCCTTAGTAAAACATTTTATCTTATTAGGGAATATAAGTTTTAGTTATAAATTATTTTTTATTCGCTAGAAAA
ACATTTTAGCTTATTAGAAAATATATGAGCAACCGATGAGGCTTATAGATTATTTGTAATCCTCTCCGTCCTTCCGTGTGTACTAGGACCATCTTGAATC
TTCTACTACCAAAAAAAAAAAAACTACTACTACTTTCAATTATGTGGTGACTATCTATCTACTGCTAGTCTGCTACTGTACTGGAGTGATACGGAGTAAG
AACGGTAAGAGCAAATTCAACACTACGGTATGCTTAATAATGTTCATGTAGTACTATCTGAAGGAGATCTGAAAATTGACAATCTGTAGGCATGCGAATA
GCAATAAAACTGTGTAATTTTAGAAATTTTTTCTTCCGAAAAGAATTAAGAGTTTTTGAAGGAAATTATTGCTTCTCTTCTGTTCAATATGCGCTTGCTT
TTATCAAAGAGGATATATAGGATATTCTTCCACTGCTTTTCATTCCTTTTTGTACACATCTGTCATTCTTCCGATCTAAACAAACTAATATTCTCATACT
AACACATGCATGTTAGTTGTTAGATTAAAGCATCTACCGTCACTTAAGCTCCAATTAAGCAAGCACAATTTTCAAAGAGAAGAAAAGAAAAAGAAAAATT
TGGGAGAGCTAGCTCCGATGCTTCTTACCGGGACATGTGAGTCGCGGGCGTTGCGCTTGGGGTCGGTGGCGGAGAAGACGGTGTAGACGAGCACGAAGGT
GCCGATGATCTCGGCGGCGAGGGTGTTGGCGCCGCCGCCGTACCTGTTGAAGTAGGCGCTCTGGAACGCCTTGACGAGGCCGACGCCGCAGATGGCGCCG
AGGCACTGCGCCACGATGTAGAGGATGGCGCGGACCAGGGACACCTTGCGCGCCAGGAAGAGCCCGAACGTCACCGCCGGGTTGATGTGCCCGCCGGAGA
TGCCGGCGGTGCAGTAGACCAGGATGAAGATCATGCCGCCGAACGCCCACGCGATGCCGAGCACGCCCACGCCGCCGCACGCCGCGTCGGCGCCGGAGGC
CGACGCGTCCGTCTGGTGCTTGTACCCGATCACCGTGGCCACGGTGATGTACAGGAACAGCAGCGTGGCGATGAACTCGGCGATGACGGCGCGGTACAGC
GACCACGACCCCAGCTCCGCCGCGTCGATCAGCGGCGCCGG