CANTATAdb - search

Detailed information on CNT30102427

BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H3P9|HAK7_ORYSJ, E-value = 8e-87

BLAST vs NONCODE: nothing found

Expression of CNT30102427

Peptides detected in this lncRNA

>peptide 1 (60 aa)
QLVPHLGVDPLLLRNLKTDSATPAETTGLLLVDGLESLITRPVPVVSSVCMTAILPSEDS*

>peptide 2 (72 aa)
MHRYIRYSLGPIRPMRYGLDANEDQNLMESRQVGDKVREDGRHPGDQLCVDETDSRHPNDPKARTKCQDPFH*

>peptide 3 (37 aa)
MRPIPGTRTIPRLGPSVRIHFIETLFWRSNRYFLREP*

>peptide 4 (31 aa)
SSSRTWGSIRSSSAISKRTLRRRLRLPDSCS*

Sequence

>CNT30102427
CAGCTCGTCCCGCACCTGGGGGTCGATCCGCTCCTCCTCCGCAATCTCAAAACGGACTCTGCGACGCCGGCTGAGACTACCGGACTCCTGCTCGTAGATG
GACTGGAGTCCCTCATCACCAGACCGGTGCCGGTTGTGTCCTCTGTGTGTATGACAGCCATCCTCCCTTCCGAAGATTCGTAGCTCCCAGAGGAGGCTGC
CTCCTCGGCTTCCATTTGGATGAACTTGGCAATGCTCATCACCAAGTGGTTCTCAAAGTTCTCGTCATCTTTCTGCACATCTTTGTAGCCATACCTCACG
ATGCACCGGTACATACGGTATTCCCTGGGGCCGATCCGTCCAATGAGGTACGGACTTGACGCAAACGAAGACCAGAACCTGATGGAAAGCAGGCAGGTTG
GTGACAAAGTGCGAGAAGATGGAAGGCACCCCGGTGACCAGCTCTGTGTAGATGAGACCGATTCCAGGCACCCGAACGATCCCAAGGCTCGGACCAAGTG
TCAGGATCCATTTCATTGAGACCTTGTTCTGGAGATCAAACAGGTACTTCCTCCGAGAGCCGTAGTGCCATACGTACATGACGAGCATGAACATGAAGGC
AAATACGATTGGCGCCCATCCTCCCTGAGGAACTTTAGTGACTGCTGCCGACAGGTACACCACTTCGATTGACC