Detailed information on CNT30102419


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697161Oryza rufipogonOryza sativa67.7710099.02204reverse complement
CNT30256205Oryza rufipogonAvena sativa38.549.385.34116reverse complement
CNT3015666Oryza rufipogonZea mays35.883.4287.96108reverse complement

Expression of CNT30102419

Peptides detected in this lncRNA

>peptide 1 (99 aa)
ATVVVAVVRIAAFRRDRLSSPSSLPSSCNVPPPPGRAHLHLIAFKGHRLPSQTNTYLFCTLCPHSCAPGKNFPVGHPSHIAPGQARLTLEFFGDWLPEKK

>peptide 2 (40 aa)
PPSSLPLSASPPFAATGSRAHRHSRVHVTSRLPQAGPTYI*

Sequence

>CNT30102419
CGCCACCGTCGTCGTTGCCGTTGTCCGCATCGCCGCCTTTCGCCGCGACCGGCTCTCGAGCCCATCGTCACTCCCGAGTTCATGTAACGTCCCGCCTCCC
CCAGGCCGGGCCCACTTACATCTGATAGCTTTCAAAGGTCATAGACTGCCCTCACAGACCAACACATATCTTTTCTGCACACTTTGTCCTCACTCGTGTG
CACCCGGGAAGAATTTCCCGGTCGGTCACCCATCCCATATTGCTCCAGGCCAAGCACGCTTAACCCTGGAGTTCTTTGGAGATTGGCTTCCGGAAAAGAA
G