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Detailed information on CNT30102295


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001336, E-value = 6e-112

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692791Oryza rufipogonOryza sativa37.4362.8795.31320forward
CNT30552152Oryza rufipogonOryza glaberrima38.4826.7593.31329forward
CNT30370894Oryza rufipogonOryza glumipatula30.9930.7193.21265forward

Expression of CNT30102295

Peptides detected in this lncRNA

>peptide 1 (55 aa)
PHQIRPLRCSSFQISCGNRFLSISSILSPRNPLESRGISRGFDAVLSSYFPANPN*

>peptide 2 (45 aa)
PTKFVLSVAPLSKLVVGIDSSRSPLSYPQETPLNPVVYRVDSTRF*

Sequence

>CNT30102295
TCCCCACCAAATTCGTCCTCTCCGTTGCTCCTCTTTCCAAATTAGTTGTGGGAATAGATTCCTCTCGATCTCCTCTATCTTATCCCCAAGAAACCCCCTT
GAATCCCGTGGTATATCGCGTGGATTCGACGCGGTTTTGAGTTCCTATTTTCCGGCGAACCCTAACTAATCCGTCGCCGATTCCATCCGTTCCCAAGCCG
ATCTCTCCCTCTTCCGGCTATAAATAGCATCCCCTAGCCGTGCTCTTCCGTTTGCCTCTAGTCCCAAGTCGAGCCGTCGCCTGTAGCGCCGCCGCCACGT
TGTCTAAGCCGCCGCCGACGCCGGCGATCCTCCGGTCGCATCGCGCCGCCTCTAGCACCGTCGCCGTCGCTGTCCGTCGCCGCCGTCGGGTGCGCACGGA
GGAGTACCTCGGCCGCCCCTTCGCCGCTGTCGCAAGCCGCCGGAGCGCCGCCGCCGCCGTCAACCCAAGCCGAGCCGCCGTCGAAGCACGTTGCCGGCCG
CCGTTCGTCGTCGTCCGTCGTGTTTTCTTGCATCGTTTCCGACGTTCCGGAGGAGAGCGTTTTCGTTGAGGAAGGTTCGGAAGCGTTCGAAGAAGCTCAA
GTTGAAGAAAAAGGATCCAGAAGGAGAAGACGTTTGGCTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGAAGTCATCGCTAGATCGTTAATTCC
GCTGCTGTTTTCTTTTCTTTTGTAAGTATGTAACGTTATTATTATGATGGATTTGTATATTAAATTGTCAGTGTGTACCTCGGCTGATTTCTAGACGAGG
ATTTTATGCACAAATAAGTTCGGAAATCACTAGTGAATTTCCGGGCGTGACATCT