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Detailed information on CNT30102265


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002248, E-value = 1e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692090Oryza rufipogonOryza sativa41.626.7494.14307forward
CNT30575685Oryza rufipogonOryza barthii41.693.8893.49307forward

Expression of CNT30102265

Peptides detected in this lncRNA

>peptide 1 (87 aa)
PELPSCTCAAAASSTKSAASRAPFAKLVEGKYSSYPPLSFPPRIALYPEEINAESNSFSSLSLQLTLGFSGSNPLVWSPISLIQAYK*

Sequence

>CNT30102265
GCCCGAGCTGCCGTCCTGTACCTGTGCAGCCGCCGCTTCCTCCACCAAATCCGCCGCATCCCGTGCTCCGTTTGCAAAATTAGTTGAGGGGAAATATTCC
TCTTATCCTCCTCTATCCTTTCCCCCAAGGATCGCACTTTATCCCGAAGAAATCAACGCGGAATCGAATTCGTTTTCGAGTTTATCTCTCCAACTAACCC
TCGGATTTTCCGGCTCAAATCCTCTCGTTTGGAGTCCGATCTCTCTAATCCAAGCCTATAAATAGCATCCCCTTGGCGTCCTCTTTCGTTTGCCCCAACT
CCCGAGCCTTCTCGTCCCCCGTAGCGCCGCCGCCGGCCGCCGTCCAGCCGCGCTGCGCCGTCGCGTTAGCAGTCGCCGCCGCTTCCCGTCGCCGCCGTTA
GGTGCGCACGGAGGTGGGGAACCTCGGCCGCCCCCTCGCCGCCGTCGCCGGTCACCGGAGAGCCGCCGCCGCCGACGACCCGAGCCGTGTCGCCGCTAGA
GCTCGCCGCCGGCCGCCATTCGTCGTCGTCGGTCGTGTTTGCTAGTACCGTTTCCGACGTTCCGGAGGAGAGCGTTTCAGTTGGGGAAGGTTCAGAGGTT
TTTGTGGAAGCTCAAGAGGAGGAGTACTTCAGTGAAGGTGATGATCTGGAGGATTAGGCTTGGTCCGGGTTAAGTTGCCTCTGGAGTGGAGTCGCCATAG
CTGTTCTGTAGTTTGTTTTATTTTCTGCTGCGTGGAAT