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Detailed information on CNT30102244


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M8S0|MBS1_ARATH, E-value = 4e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30598181Oryza rufipogonFraxinus excelsior13.528.7783.3384forward
CNT30687535Oryza rufipogonTriticum urartu35.2169.7590.41219forward
CNT30111004Oryza rufipogonOryza longistaminata63.1832.4396.95393reverse complement
CNT30583583Oryza rufipogonEchinochloa crusgalli45.1834.5292.17281forward

Expression of CNT30102244

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MDLMSGAVVLQRGHSSLAWPPLSCPSRSFCPAFPPPLFVVAASIFAAISFAVCFFGF

>peptide 2 (45 aa)
MYMCANQRIYHTAHHDTVVIIQNSKQQQVSTPERAAAGGSSSRFG*

Sequence

>CNT30102244
TGAGTGAGCAAACGGATTTAGCCATCACCTTTTTCTTTACTCAGATTTAGCAATTGTTTGAGCAGTGACAGACATAAACATTATCATCCATTGACACCAT
TGACAGCATCATAGAGTAGTGACACATAAACTAAACATCATAGCTAAAACATGCCGACGAAGACGCGACGGAACACGGTCACATATGTATATGTGCGCGA
ATCAACGCATCTATCACACGGCACATCATGACACAGTAGTAATAATTCAAAACAGCAAGCAGCAGCAAGTAAGCACACCGGAGCGAGCGGCGGCGGGCGG
TAGTAGTAGCAGATTCGGGTGATGATGGATTCGATTGCGGTTACTTCTTGAGGCTGCCGCGGACGCCGGGCTTGGGCTTGGAGGAGGAGGTTGTTGAGCT
TGTCGGGCTCGAAGGGGAGCTTGGGGTGGCGCGCCTCGTGGTGGATCTGCATGGACTTGATGTCGGGGGCGGTGGTCTTGCAGAGAGGGCACTCGAGCTT
GGCGTGGCCGCCCTTGTCCTGCCCCAGCCGGTCCTTCTGCCCGGCCTTCCCGCCGCCCCTGTTCGTCGTCGCCGCGTCGATCTTCGCCGCGATCTCCTTC
GCCGTGTGCTTCTTCGGCTTCG