Detailed information on CNT30102214


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000954, E-value = 9e-155

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694553Oryza rufipogonOryza sativa10062.06100301forward

Expression of CNT30102214

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MMYVPFSHVPLIVILFHFHPAGLSRLRGCVCRRKCYEG

>peptide 2 (73 aa)
MITDVCKNGDLNALLRRSPLGLCGGLCSSTVLPPFPIIFHQFHDVCSIFTCPSHCHSLPLPPSRLKQAPGMRM*

Sequence

>CNT30102214
TGTTTGTGGGAGATTATAAGTTAACTTGCTTTGTTGGGGCATCTTGATCTGCAAGCCTAATGATTACTGATGTTTGTAAGAACGGAGATCTGAATGCGCT
CCTCCGTCGAAGCCCGCTTGGTCTATGTGGTGGATTATGTAGTAGTACTGTACTCCCTCCGTTTCCCATAATATTCCATCAATTTCATGATGTATGTTCC
ATTTTCACATGTCCCTCTCATTGTCATTCTCTTCCACTTCCACCCAGCAGGCTTAAGCAGGCTCCGGGGATGCGTATGTAGACGCAAGTGTTATGAAGGC
T