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Detailed information on CNT30102166


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01401|GLGB_ORYSJ, E-value = 8e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694476Oryza rufipogonOryza sativa72.5339.15100404forward
CNT30189679Oryza rufipogonSecale cereale34.1128.2391.05190forward
CNT30688548Oryza rufipogonTriticum urartu30.3426.0888.76169forward

Expression of CNT30102166

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVCEHHVNNCIHIGIQTEILLVVSSKSLIDTMVMV*

>peptide 2 (47 aa)
MAIARRKSNPTPPSSTGRQSTGMPETSSATIVASGKSLCIKWFASIM*

>peptide 3 (49 aa)
MKSTTIKGKITFWSAMPRLMAMHFSVYLLLVKVCTISLIDHLRSSLFFR*

Sequence

>CNT30102166
ATATTAAAAGAGGCCAGGACACATTGTATTCAAATAACGACCAGAAATTTTAGTAAATCTATGGACATTACAACAATTGTCTAGAACTAGCACCATGAAA
TCAACAACAATTAAGGGGAAAATAACCTTTTGGAGTGCAATGCCACGGTTGATGGCAATGCATTTTTCTGTATATCTCCTGTTAGTCAAAGTTTGCACTA
TTTCACTCATTGACCATTTGCGGTCCTCTTTGTTCTTCAGGTAGTCAATCCATCTATCAGGAATGGCCATTGCCAGGCGGAAGTCAAACCCTACTCCACC
TTCATCAACTGGCCGACAAAGCACTGGCATGCCCGAAACATCTTCAGCAACAATAGTTGCTTCCGGCAAGAGTTTATGCATTAAATGGTTTGCGAGCATC
ATGTAAACAATTGCATCCACATCGGTATCCAAACTGAAATACTCCTTGTAGTTTCCAGTAAATCCCTTATTGATACCATGGTGATGGTATAGCATTGATG
TAACCCCATCAAATCGGAAGCCATCAAACATGAATTCGTCCATCCAATATCTCAAAT