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Detailed information on CNT30102095


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000961, E-value = 1e-119

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692810Oryza rufipogonOryza sativa58.9710.9299.28138forward
CNT30378683Oryza rufipogonArabidopsis thaliana58.5517.0691.24137forward
CNT30198744Oryza rufipogonPisum sativum58.5537.6487.59137forward
CNT30300480Oryza rufipogonTriticum aestivum58.9710.5395.65138forward
CNT30391503Oryza rufipogonTriticum turgidum58.9727.696.38138forward
CNT3089384Oryza rufipogonVigna radiata56.4116.2688.64132forward
CNT30540534Oryza rufipogonBrassica napus58.5511.9391.97137forward
CNT30555706Oryza rufipogonOryza glaberrima58.9720.1599.28138forward
CNT30145403Oryza rufipogonMedicago truncatula38.4633.4692.2290forward
CNT30598581Oryza rufipogonFraxinus excelsior51.7134.2893.39121forward
CNT3018289Oryza rufipogonZea mays58.125.2494.85136forward
CNT30605440Oryza rufipogonGossypium raimondii58.9733.7490.58138forward
CNT3067891Oryza rufipogonLeersia perrieri29.4911.1397.169forward
CNT30655381Oryza rufipogonRosa chinensis21.379.359250forward
CNT30685372Oryza rufipogonTriticum urartu58.9715.0596.38138forward
CNT30360309Oryza rufipogonLactuca sativa56.4122.9692.42132forward
CNT3058320Oryza rufipogonAmborella trichopoda58.9719.8688.41138forward
CNT30147990Oryza rufipogonBrachypodium distachyon31.624.8997.374forward

Expression of CNT30102095

Peptides detected in this lncRNA

>peptide 1 (32 aa)
KNFLLLSYNTHLYLVINKPPVSLFFSLLSQIF*

Sequence

>CNT30102095
CAAAGAATTTCCTGCTGCTATCATATAATACTCATCTCTATTTGGTGATAAATAAACCACCTGTCTCTCTTTTTTTTTCTTTGCTTTCTCAGATATTTTA
GATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTAAAACT
AGCATATTGGAAGATTAATCGGCCCAAATAACCA