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Detailed information on CNT30102051


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108675Oryza rufipogonOryza longistaminata53.310098.89719forward
CNT30576727Oryza rufipogonOryza barthii78.5100.1999.341059forward
CNT30116964Oryza rufipogonOryza nivara81.2590.0699.271096forward

Expression of CNT30102051

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MCRPGSSSPHNPPAGLDLPSLSGAPAACLLSLLSSRGWGPSGRSPPRYRASLSSSRKMQVVDPGYCSSWSWVTCFC*

>peptide 2 (63 aa)
MNMCNCLVVVFGELGCYVQQYFSLFSPYHENMCILSPMCNFVGHLIEQKFNYYDITMFLFLLI*

Sequence

>CNT30102051
AGAAAATGGCTGATAGTGGTGTGGAAAGAAGGAATTTGCACTCCCAGGGGTAGATTCTGAGAGTCATGCGAATTAGGTGGTAAATGCTGTGAGTCCTCCC
AATTCGGTGGTAAATAGTGAAAATTCTCTATTTTTTCGGATCTAAGAGAGAGAGGTGGTGGCTAGTGGAGCTGTTGAGCACCGACGCCCCTGGCTAGGAA
CGGCGGCAGATCTGGCGGCTCGGTGCGAAAGCTGAACGGCGGCAGTTACAAGCCCGGCCGTCCTCCAGGCGCGGTGATCCTCCACCGCCGGCCGACCTCA
TCCCCATCCTTTCTCCCGCCGTCTGGTCGCCGCTATTTGAGGTGCGCCGGGAGGTGGCTCGGTGGAGCGGTTGAGCGACGGCTGTCGGCTAGGAGCAGCG
ACAGATTTGGAAGCTCGGTGCAGAAGGTGAACGGCGACGGTGACAAGCCGGCCGTCCTCCATTCGTGGCAATCCATCACCATCGGCCAACCTCATCCCCG
TCTTCTCTCTTGCCGTCTGGTCGTCGCCATTCGAGATGTGTCGCCCGGGTTCGTCGTCGCCGCATAATCCACCTGCCGGCCTGGATCTGCCCTCCCTCTC
TGGCGCACCTGCCGCTTGTCTCCTCTCACTGCTGTCGTCGAGGGGATGGGGCCCTTCCGGCCGCTCTCCTCCCAGGTATAGGGCGTCACTATCCTCATCC
AGGAAGATGCAGGTGGTTGATCCTGGCTATTGTTCTTCGTGGTCGTGGGTAACCTGCTTCTGCTGAGGAGAAGATCTGGAGATTCTCATGTCCTTTTGTC
TCAGTTCTGGATTGCTGCAACAATGTGTCTATGCTTGCGTTTTCTTGATCTAGATCTCGAGGCGAGACCGTACTGGTGTTATTGCATTTAATTTGTTTTT
TTTCCCGATTCTTGGGTAAATGCTTCACTTGGGCTTGTTGAGTTTCCAGGAAAGAGATCCAGGAGGGGAGCACTTTGTGGGGTGATTTATCCTTGATTCT
AAAATGGGAGGATAGCTGGCACCAGCGTGGTGGTGGTGTTTTTCTTGGATCACGATGAATATGTGTAATTGTCTAGTTGTGGTGTTTGGCGAGTTGGGAT
GTTACGTGCAGCAGTATTTTTCTCTTTTTTCCCCTTATCATGAGAATATGTGTATTTTGTCTCCCATGTGTAATTTTGTTGGTCACTTGATAGAACAAAA
ATTCAATTATTATGACATAACCATGTTCTTGTTCTTGTTAATATAGTGAAAAAAATATTATTTACAAATAACTGGTAATGTTTTTACAAAATCATGTCAA
AGCATAGTGAACAAATTACTAAATGCAAACAGAGTAAATCATGTCCTGG