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Detailed information on CNT30101984


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697705Oryza rufipogonOryza sativa11.3422.7483.8793forward

Expression of CNT30101984

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLQVSSFYIAIFHISIHHLWGHAVNFFRK*

>peptide 2 (38 aa)
MYSANARIFRYFFFMSCSQGQWHPRFIAARTTSASSPPP

>peptide 3 (92 aa)
VTRWGPAVPPQPGPFHLMMMAVSKFSVLSECSKFQVSILQFFISPFIIYGGMLSIFLENNITETLHASSKTKIMDKQISAHVQLMYRVNTHI*

Sequence

>CNT30101984
GTGACTCGCTGGGGCCCTGCCGTGCCACCGCAGCCGGGGCCCTTCCACTTGATGATGATGGCTGTTTCCAAGTTTTCTGTGTTGTCTGAATGCTCCAAGT
TTCAAGTTTCTATATTGCAATTTTTCATATCTCCATTCATCATTTATGGGGGCATGCTGTCAATTTTTTTAGAAAATAACATCACAGAAACTCTGCATGC
TTCTTCCAAGACAAAGATCATGGACAAACAGATATCAGCTCATGTGCAGTTAATGTACAGAGTAAATACTCATATTTGATTGGAAGATTAAGGTGAAATC
AGAAGCAAAGAGAGAACAAGGTGTTAATGAAGCTTTATAACTTCTTCAAGTCCCAGCATGAAAATGGTAGGAATAGGATGGCATGATGACATCATGAAAA
TGTAACACATGAACTGAAACACTTTGAGATCAGAAAACACAGGAGTTCAGTTGCAGTTTCAGGTTTAACAAGAGAACATAAGCAATGTATGCGTTTCCAT
CTGAATGGAATGCAATACTACAGAGGTTAAATAGTACTAGTACATAATCTGATTTGTCTATCAGCTGATGTAATCTTTTGAGGGTACATTGTTGCAAACA
GAATTGATATAAACAACGGCGGAATACTCTTGGGACAGCACCATGTCCATTTCATTCTGCAGAACTAACAAGTAGATTGCAAGTGTGTAAACATCTCAAA
CTATGTACTCTGCCAACGCCAGGATTTTCAGATACTTCTTTTTCATGAGTTGTTCACAAGGACAATGGCATCCTCGCTTCATAGCAGCACGGACAACCAG
CGCGTCATCACCGCCTCCGG