Detailed information on CNT30101982


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30443838Oryza rufipogonAegilops tauschii27.5231.1294.67150forward
CNT30229576Oryza rufipogonAnanas comosus24.0418.485.5131forward
CNT30596416Oryza rufipogonOryza meridionalis84.77101.7694.37462forward
CNT30576681Oryza rufipogonOryza barthii101.6595.3597.47554forward
CNT30114821Oryza rufipogonEutrema salsugineum20.5510.7281.25112forward

Expression of CNT30101982

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MLAPTMKPMAMGAMVPSDPFLGSAAVAYTVYTSPKVTMISITTPSNAPT

>peptide 2 (29 aa)
PICEEKTQAYFGGYKQTEMTWPESNEISQ*

>peptide 3 (32 aa)
MAKWVIRTRCWQRGRGRRTCRRTGRRGCWRRR*

Sequence

>CNT30101982
CCTATTTGCGAGGAGAAGACACAAGCTTATTTTGGAGGCTACAAACAAACTGAAATGACATGGCCCGAATCAAATGAAATCTCACAATGAAACTCAACAG
AAGTGTTCGATCTTAAACATGCATCTCATCCAACTTGCTCCACACTGATCACATTACAAATTAATCAAGAAGAAACTAAACATGGATCGATCATCACCCA
AGTGTCACATCCTCGCAACAAAAGCCTTCTTCCCCATCTGAACCAAATCAGTCCTTCACAACACATCCTCACAAGATTCTGACGATGGAGTGACCACCAT
TTTTATGCGTGTTGCCGATGGCGAAATGGGTAATTAGAACTCGCTGCTGGCAACGGGGGCGTGGTCGCCGCACATGTAGACGTACCGGTAGACGAGGATG
TTGGCGCCGACGATGAAGCCGATGGCGATGGGCGCGATGGTGCCGAGCGACCCCTTCTTGGGGTCGGCGGCGGTGGCGTACACGGTGTACACCAGCCCGA
AGGTGACGATGATCTCCATCACCACGCCCTCGAACGCGCCCACGC